Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG40_RS00285 | Genome accession | NZ_CP094088 |
| Coordinates | 63953..64528 (+) | Length | 191 a.a. |
| NCBI ID | WP_245063804.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe092 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 58953..69528
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG40_RS00260 (MPG40_00260) | uvrD | 59644..61689 (+) | 2046 | WP_245063795.1 | DNA helicase UvrD | - |
| MPG40_RS00265 (MPG40_00265) | flgA | 61686..62342 (+) | 657 | WP_245063797.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG40_RS00270 (MPG40_00270) | - | 62352..62915 (+) | 564 | WP_245063800.1 | UbiX family flavin prenyltransferase | - |
| MPG40_RS00275 (MPG40_00275) | coaD | 62915..63388 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG40_RS00280 (MPG40_00280) | tmk | 63390..63965 (+) | 576 | WP_245063802.1 | dTMP kinase | - |
| MPG40_RS00285 (MPG40_00285) | comFC | 63953..64528 (+) | 576 | WP_245063804.1 | ComF family protein | Machinery gene |
| MPG40_RS00290 (MPG40_00290) | - | 64561..66600 (+) | 2040 | WP_245063806.1 | N-6 DNA methylase | - |
| MPG40_RS00295 (MPG40_00295) | - | 66597..67262 (+) | 666 | WP_245063808.1 | restriction endonuclease subunit S | - |
| MPG40_RS00300 (MPG40_00300) | - | 67231..67863 (+) | 633 | WP_245063810.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21339.98 Da Isoelectric Point: 9.4747
>NTDB_id=666641 MPG40_RS00285 WP_245063804.1 63953..64528(+) (comFC) [Helicobacter pylori strain Hpfe092]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKTGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRNFTFKGDKNLDYFLLDDII
TTGTTLKEALKHLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKTGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRNFTFKGDKNLDYFLLDDII
TTGTTLKEALKHLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666641 MPG40_RS00285 WP_245063804.1 63953..64528(+) (comFC) [Helicobacter pylori strain Hpfe092]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTATATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAACCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCACTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGCGCTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGACAAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAACACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCACTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTATATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAACCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCACTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGCGCTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGACAAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAACACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCACTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.241 |
100 |
0.942 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.979 |
100 |
0.372 |