Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG15_RS00275 | Genome accession | NZ_CP094087 |
| Coordinates | 62640..63215 (+) | Length | 191 a.a. |
| NCBI ID | WP_245079451.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe093 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 57640..68215
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG15_RS00250 (MPG15_00250) | uvrD | 58331..60376 (+) | 2046 | WP_245079448.1 | DNA helicase UvrD | - |
| MPG15_RS00255 (MPG15_00255) | flgA | 60373..61029 (+) | 657 | WP_245079449.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG15_RS00260 (MPG15_00260) | - | 61039..61602 (+) | 564 | WP_220964314.1 | UbiX family flavin prenyltransferase | - |
| MPG15_RS00265 (MPG15_00265) | coaD | 61602..62075 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG15_RS00270 (MPG15_00270) | tmk | 62077..62652 (+) | 576 | WP_245079450.1 | dTMP kinase | - |
| MPG15_RS00275 (MPG15_00275) | comFC | 62640..63215 (+) | 576 | WP_245079451.1 | ComF family protein | Machinery gene |
| MPG15_RS00280 (MPG15_00280) | - | 63248..65287 (+) | 2040 | WP_245079452.1 | N-6 DNA methylase | - |
| MPG15_RS00285 (MPG15_00285) | - | 65284..66554 (+) | 1271 | Protein_55 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21282.94 Da Isoelectric Point: 9.1280
>NTDB_id=666620 MPG15_RS00275 WP_245079451.1 62640..63215(+) (comFC) [Helicobacter pylori strain Hpfe093]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGCLRATNTISYAGKSLEFRANNPRNFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGCLRATNTISYAGKSLEFRANNPRNFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666620 MPG15_RS00275 WP_245079451.1 62640..63215(+) (comFC) [Helicobacter pylori strain Hpfe093]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTATATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGAATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGTGTTTAAGGGCGACTAATACTATTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTCTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCGCTTTG
CAGTGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTATATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGAATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTATGGGTGTTTAAGGGCGACTAATACTATTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTCTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCGCTTTG
CAGTGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.764 |
100 |
0.948 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.979 |
100 |
0.372 |