Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG55_RS00305 | Genome accession | NZ_CP094083 |
| Coordinates | 64259..64834 (+) | Length | 191 a.a. |
| NCBI ID | WP_245028647.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe096 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 59259..69834
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG55_RS00280 (MPG55_00280) | uvrD | 59950..61995 (+) | 2046 | WP_245028641.1 | DNA helicase UvrD | - |
| MPG55_RS00285 (MPG55_00285) | flgA | 61992..62648 (+) | 657 | WP_245028643.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG55_RS00290 (MPG55_00290) | - | 62658..63221 (+) | 564 | WP_000780121.1 | UbiX family flavin prenyltransferase | - |
| MPG55_RS00295 (MPG55_00295) | coaD | 63221..63694 (+) | 474 | WP_245029439.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG55_RS00300 (MPG55_00300) | tmk | 63696..64271 (+) | 576 | WP_245028645.1 | dTMP kinase | - |
| MPG55_RS00305 (MPG55_00305) | comFC | 64259..64834 (+) | 576 | WP_245028647.1 | ComF family protein | Machinery gene |
| MPG55_RS00310 (MPG55_00310) | - | 64867..66906 (+) | 2040 | WP_245028649.1 | N-6 DNA methylase | - |
| MPG55_RS00315 (MPG55_00315) | - | 66903..67565 (+) | 663 | WP_245028651.1 | restriction endonuclease subunit S | - |
| MPG55_RS00320 (MPG55_00320) | - | 67537..68166 (+) | 630 | WP_245028653.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21270.88 Da Isoelectric Point: 8.7493
>NTDB_id=666579 MPG55_RS00305 WP_245028647.1 64259..64834(+) (comFC) [Helicobacter pylori strain Hpfe096]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGCLRATNTISYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGCLRATNTISYAGKSLEFRANNPRNFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666579 MPG55_RS00305 WP_245028647.1 64259..64834(+) (comFC) [Helicobacter pylori strain Hpfe096]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGTTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCAGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACCTACGGGTGTTTAAGGGCGACTAATACTATTTCGTATGCTGGGAAAAGCCTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCTCTTTG
CAGTGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGTTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCAGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACCTACGGGTGTTTAAGGGCGACTAATACTATTTCGTATGCTGGGAAAAGCCTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCTCTTTG
CAGTGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.979 |
100 |
0.372 |