Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG844_RS28905 Genome accession   NZ_CP108788
Coordinates   6306031..6307155 (-) Length   374 a.a.
NCBI ID   WP_406394209.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00887     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6301031..6312155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG844_RS28880 (OG844_28840) cseB 6301747..6302454 (-) 708 WP_406394204.1 two-component system response regulator CseB -
  OG844_RS28885 (OG844_28845) - 6302463..6303155 (-) 693 WP_406394205.1 hypothetical protein -
  OG844_RS28890 (OG844_28850) - 6303143..6303727 (-) 585 WP_406394207.1 SigE family RNA polymerase sigma factor -
  OG844_RS28895 (OG844_28855) - 6303910..6304812 (-) 903 WP_406394208.1 A/G-specific adenine glycosylase -
  OG844_RS28900 (OG844_28860) - 6305094..6305909 (+) 816 WP_406396292.1 hypothetical protein -
  OG844_RS28905 (OG844_28865) disA 6306031..6307155 (-) 1125 WP_406394209.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG844_RS28910 (OG844_28870) radA/sms 6307236..6308648 (-) 1413 WP_329209821.1 DNA repair protein RadA Machinery gene
  OG844_RS28915 (OG844_28875) - 6308843..6310585 (+) 1743 WP_406394211.1 BACON domain-containing protein -
  OG844_RS28920 (OG844_28880) - 6310714..6311553 (-) 840 WP_406394212.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40301.23 Da        Isoelectric Point: 4.9385

>NTDB_id=666565 OG844_RS28905 WP_406394209.1 6306031..6307155(-) (disA) [Streptomyces sp. NBC_00887]
MAANDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKACVYPVVSVSQSMHLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=666565 OG844_RS28905 WP_406394209.1 6306031..6307155(-) (disA) [Streptomyces sp. NBC_00887]
GTGGCAGCCAACGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGCAACGAGGCGCTGATGCGCGCCTCGTT
GAGCGCAGTGGCGCCCGGTATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGTGGCAACACCGGCGGGCTGATCGTCC
TCGGCATGGACAAAACCGTCGAATCCATGTGTACCGGTGGGTTCGTGCTGGATGTCGAGTTCACCGCGACGCGGCTGCGC
GAGCTGGCCAAGCTGGACGGCGCCCTGATCCTCGACAAGGACATGACCAAGATCCTTCGGGCCGGAGTACAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAAGCGTGCGTGTACCCGG
TCGTCTCGGTCTCCCAGTCGATGCACCTCATCGCGCTGTACGTGGACGGGGAGCGAAGGGTCCTGGAGGAGTCCTCCGCG
ATCCTGTCCCGTGCCAACCAGGCGCTCGCCACGCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTCGCCGGGACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTGCGCAGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCAGGCTCCTGTCGCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAACCCGAGCGGGAGCTGGTCGTACGGGACTACGTGCCCGAACCGACCGCGAAGCGGTCCCGTACGGTCGCGGA
GGCGCTGACCGAGCTGGACGCGCTCTCGCACACGGAGCTGCTCGAACTTCCGGTGGTGGCGCGGGCGCTGGGCTACAGCG
GTTCGCCCGAGACGCTGGACTCCGCGGTCTCGCCGCGGGGCTTCAGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTCCAGGCGGTGGA
CGGGGTCGGCGAGGCGCGGGCCCGGAGCGTACGGGAAGGGCTCTCGCGACTGGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436