Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG63_RS00285 | Genome accession | NZ_CP094082 |
| Coordinates | 61715..62290 (+) | Length | 191 a.a. |
| NCBI ID | WP_245047299.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe097 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 56715..67290
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG63_RS00260 (MPG63_00260) | uvrD | 57406..59451 (+) | 2046 | WP_245047295.1 | DNA helicase UvrD | - |
| MPG63_RS00265 (MPG63_00265) | flgA | 59448..60104 (+) | 657 | WP_245047296.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG63_RS00270 (MPG63_00270) | - | 60114..60677 (+) | 564 | WP_245047297.1 | UbiX family flavin prenyltransferase | - |
| MPG63_RS00275 (MPG63_00275) | coaD | 60677..61150 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG63_RS00280 (MPG63_00280) | tmk | 61152..61727 (+) | 576 | WP_245047298.1 | dTMP kinase | - |
| MPG63_RS00285 (MPG63_00285) | comFC | 61715..62290 (+) | 576 | WP_245047299.1 | ComF family protein | Machinery gene |
| MPG63_RS00290 (MPG63_00290) | - | 62323..64359 (+) | 2037 | WP_245047301.1 | N-6 DNA methylase | - |
| MPG63_RS00295 (MPG63_00295) | - | 64356..64994 (+) | 639 | WP_245047303.1 | restriction endonuclease subunit S | - |
| MPG63_RS00300 (MPG63_00300) | - | 64966..65583 (+) | 618 | WP_245047305.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21448.20 Da Isoelectric Point: 9.5807
>NTDB_id=666556 MPG63_RS00285 WP_245047299.1 61715..62290(+) (comFC) [Helicobacter pylori strain Hpfe097]
MRCLTCLKLSFKPLCLNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNIPLYGIAIDDKIKSFYSHSAVLLKGFCQGNLKPTYGRLRANNTISYAGKSLKFRTNNPRNFTFKGDKDLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCLNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNIPLYGIAIDDKIKSFYSHSAVLLKGFCQGNLKPTYGRLRANNTISYAGKSLKFRTNNPRNFTFKGDKDLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666556 MPG63_RS00285 WP_245047299.1 61715..62290(+) (comFC) [Helicobacter pylori strain Hpfe097]
ATGCGCTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTTAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTACAAGAAAAAGGC
TTGAATATTCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGTGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGCTTAAGAGCTAATAATACTATTTCGTATGCCGGGAAAAGCCTGA
AATTTCGCACCAATAACCCACGGAATTTCACCTTCAAAGGTGATAAAGATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCTTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
ATGCGCTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTTAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTACAAGAAAAAGGC
TTGAATATTCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGTGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGCTTAAGAGCTAATAATACTATTTCGTATGCCGGGAAAAGCCTGA
AATTTCGCACCAATAACCCACGGAATTTCACCTTCAAAGGTGATAAAGATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCTTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.764 |
100 |
0.948 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
37.629 |
100 |
0.382 |