Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG31_RS00270 | Genome accession | NZ_CP094074 |
| Coordinates | 60742..61317 (+) | Length | 191 a.a. |
| NCBI ID | WP_245015320.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe103 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55742..66317
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG31_RS00245 (MPG31_00245) | uvrD | 56433..58478 (+) | 2046 | WP_245015316.1 | DNA helicase UvrD | - |
| MPG31_RS00250 (MPG31_00250) | flgA | 58475..59131 (+) | 657 | WP_245015317.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG31_RS00255 (MPG31_00255) | - | 59141..59704 (+) | 564 | WP_245015318.1 | UbiX family flavin prenyltransferase | - |
| MPG31_RS00260 (MPG31_00260) | coaD | 59704..60177 (+) | 474 | WP_050844153.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG31_RS00265 (MPG31_00265) | tmk | 60179..60754 (+) | 576 | WP_245015319.1 | dTMP kinase | - |
| MPG31_RS00270 (MPG31_00270) | comFC | 60742..61317 (+) | 576 | WP_245015320.1 | ComF family protein | Machinery gene |
| MPG31_RS00275 (MPG31_00275) | - | 61350..63389 (+) | 2040 | WP_245015321.1 | N-6 DNA methylase | - |
| MPG31_RS00280 (MPG31_00280) | - | 63386..64620 (+) | 1235 | Protein_54 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21349.97 Da Isoelectric Point: 9.2796
>NTDB_id=666450 MPG31_RS00270 WP_245015320.1 60742..61317(+) (comFC) [Helicobacter pylori strain Hpfe103]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRDFTFKGDKTLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRDFTFKGDKTLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666450 MPG31_RS00270 WP_245015320.1 60742..61317(+) (comFC) [Helicobacter pylori strain Hpfe103]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCAGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGCTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACTCTAAACATCAAAGCGCACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCAGAGTTTGTGAAAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGCTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACTCTAAACATCAAAGCGCACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.812 |
100 |
0.958 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |