Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG62_RS00265 | Genome accession | NZ_CP094071 |
| Coordinates | 60833..61408 (+) | Length | 191 a.a. |
| NCBI ID | WP_245099357.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe106 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55833..66408
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG62_RS00240 (MPG62_00240) | uvrD | 56524..58569 (+) | 2046 | WP_245100155.1 | DNA helicase UvrD | - |
| MPG62_RS00245 (MPG62_00245) | flgA | 58566..59222 (+) | 657 | WP_245099351.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG62_RS00250 (MPG62_00250) | - | 59232..59795 (+) | 564 | WP_000780128.1 | UbiX family flavin prenyltransferase | - |
| MPG62_RS00255 (MPG62_00255) | coaD | 59795..60268 (+) | 474 | WP_014727242.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG62_RS00260 (MPG62_00260) | tmk | 60270..60845 (+) | 576 | WP_245099354.1 | dTMP kinase | - |
| MPG62_RS00265 (MPG62_00265) | comFC | 60833..61408 (+) | 576 | WP_245099357.1 | ComF family protein | Machinery gene |
| MPG62_RS00270 (MPG62_00270) | - | 61441..63480 (+) | 2040 | WP_245099359.1 | N-6 DNA methylase | - |
| MPG62_RS00275 (MPG62_00275) | - | 63477..64703 (+) | 1227 | WP_245099362.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21334.96 Da Isoelectric Point: 9.5959
>NTDB_id=666411 MPG62_RS00265 WP_245099357.1 60833..61408(+) (comFC) [Helicobacter pylori strain Hpfe106]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLGGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRTNNPRNFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLGGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRTNNPRNFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666411 MPG62_RS00265 WP_245099357.1 60833..61408(+) (comFC) [Helicobacter pylori strain Hpfe106]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGGGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CACTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAGAATCCTACAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCACCAATAACCCACGGAATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCCCACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGGGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CACTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAGAATCCTACAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCACCAATAACCCACGGAATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCCCACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.241 |
100 |
0.942 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.979 |
100 |
0.372 |