Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG33_RS00260 | Genome accession | NZ_CP094070 |
| Coordinates | 60550..61125 (+) | Length | 191 a.a. |
| NCBI ID | WP_154443684.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe107 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55550..66125
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG33_RS00235 (MPG33_00235) | uvrD | 56241..58286 (+) | 2046 | WP_245062747.1 | DNA helicase UvrD | - |
| MPG33_RS00240 (MPG33_00240) | flgA | 58283..58939 (+) | 657 | WP_096523132.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG33_RS00245 (MPG33_00245) | - | 58949..59512 (+) | 564 | WP_033122203.1 | UbiX family flavin prenyltransferase | - |
| MPG33_RS00250 (MPG33_00250) | coaD | 59512..59985 (+) | 474 | WP_101006887.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG33_RS00255 (MPG33_00255) | tmk | 59987..60562 (+) | 576 | WP_231174850.1 | dTMP kinase | - |
| MPG33_RS00260 (MPG33_00260) | comFC | 60550..61125 (+) | 576 | WP_154443684.1 | ComF family protein | Machinery gene |
| MPG33_RS00265 (MPG33_00265) | - | 61158..63188 (+) | 2031 | WP_245062750.1 | N-6 DNA methylase | - |
| MPG33_RS00270 (MPG33_00270) | - | 63185..64432 (+) | 1248 | WP_245062752.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21378.93 Da Isoelectric Point: 8.8888
>NTDB_id=666391 MPG33_RS00260 WP_154443684.1 60550..61125(+) (comFC) [Helicobacter pylori strain Hpfe107]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRDFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRANNTISYAGKSLEFRANNPRDFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666391 MPG33_RS00260 WP_154443684.1 60550..61125(+) (comFC) [Helicobacter pylori strain Hpfe107]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAATGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAGAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCTGGGAAAAGCTTAG
AGTTTCGTGCCAATAATCCACGGGATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAATGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAGTTTGTGAGAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGCGTTTAAGGGCTAATAATACTATTTCGTATGCTGGGAAAAGCTTAG
AGTTTCGTGCCAATAATCCACGGGATTTCACCTTCAAAGGCGATGAAACTTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.812 |
100 |
0.958 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.458 |
100 |
0.366 |