Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG760_RS20325 Genome accession   NZ_CP108745
Coordinates   4557725..4558876 (-) Length   383 a.a.
NCBI ID   WP_266854642.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00963     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4552725..4563876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG760_RS20295 (OG760_20275) cseB 4552726..4553424 (-) 699 WP_266854652.1 two-component system response regulator CseB -
  OG760_RS20300 (OG760_20280) - 4553437..4554186 (-) 750 WP_401605119.1 hypothetical protein -
  OG760_RS20305 (OG760_20285) - 4554174..4554725 (-) 552 WP_266854649.1 SigE family RNA polymerase sigma factor -
  OG760_RS20310 (OG760_20290) - 4554901..4555884 (-) 984 WP_405913001.1 A/G-specific adenine glycosylase -
  OG760_RS20315 (OG760_20295) - 4555961..4556569 (-) 609 WP_328378114.1 phosphatase PAP2 family protein -
  OG760_RS20320 (OG760_20300) - 4556753..4557601 (+) 849 WP_405756017.1 hypothetical protein -
  OG760_RS20325 (OG760_20305) disA 4557725..4558876 (-) 1152 WP_266854642.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG760_RS20330 (OG760_20310) radA/sms 4558933..4560330 (-) 1398 WP_266854640.1 DNA repair protein RadA Machinery gene
  OG760_RS20335 (OG760_20315) - 4560514..4562226 (+) 1713 WP_266854638.1 BACON domain-containing protein -
  OG760_RS20340 (OG760_20320) - 4562403..4563248 (-) 846 WP_266854637.1 hypothetical protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 41092.03 Da        Isoelectric Point: 5.1127

>NTDB_id=666255 OG760_RS20325 WP_266854642.1 4557725..4558876(-) (disA) [Streptomyces sp. NBC_00963]
MAANDRAAPGRSGGSSSGNEALMRATLSAVAPGTALRDGLERILRGNTGGLIVLGMDKSVEAMCTGGFVMDVEFAATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTSPRAASGRGPQRSRTVAEALVDLNTLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLL
AKVPRLPGAIIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=666255 OG760_RS20325 WP_266854642.1 4557725..4558876(-) (disA) [Streptomyces sp. NBC_00963]
GTGGCAGCCAATGACCGAGCAGCACCCGGGAGATCCGGCGGGAGCTCGTCCGGCAATGAAGCGCTGATGCGTGCCACGCT
GAGCGCTGTCGCGCCCGGTACCGCTCTGCGCGACGGCCTGGAGCGGATCCTCCGCGGGAACACCGGCGGCCTGATCGTCC
TGGGCATGGACAAGAGCGTCGAAGCGATGTGCACCGGCGGTTTCGTCATGGACGTGGAGTTCGCCGCGACCCGCCTGCGG
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTCGACAAGGATCTGACCAAGATTCTCCGGGCCGGCGTCCAGCTCGTCCC
GGACGCGTCGATCCCCACCGAGGAGACCGGCACCCGCCATCGCACGGCGGACCGGGTCTCCAAGCAGTGCGGCTTCCCCG
TCGTCTCCGTATCGCAGTCGATGCACCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTGGCCACGCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTGGCGGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCTGTCGCGCAGCGTCTTGAGATGGTCCGGCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTGCTCTCCCTCCAGCTGGACGAGCTGATCGCG
GGGGTCGAGCCGGAGCGGGAGCTGGTGGTCAGGGACTACGTGCCGGAGCCCACCTCCCCCAGAGCTGCCTCCGGGAGGGG
CCCCCAGCGTTCGCGTACGGTCGCCGAGGCGCTGGTCGACCTCAACACGCTCAGCCACACGGAGCTGCTCGAACTGCCCG
TGGTGGCAAGGGCACTGGGGTACAGCGGCTCCCCGGAGACGCTCGACTCGGCGGTGTCGCCGCGCGGGTTCCGGCTGCTG
GCCAAGGTGCCGAGGCTGCCGGGGGCGATCATCGAACGGCTGGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCCGC
CAGCGTGGATGATCTGCAGGCGGTGGACGGCGTCGGGGAGGCGCGGGCCCGTAGCGTCCGGGAAGGCCTTTCGCGGCTCG
CGGAGTCGTCGATTCTGGAGCGGTACGTCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.628

94.778

0.423