Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG66_RS00270 | Genome accession | NZ_CP094056 |
| Coordinates | 60702..61277 (+) | Length | 191 a.a. |
| NCBI ID | WP_245024958.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe124 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55702..66277
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG66_RS00245 (MPG66_00245) | uvrD | 56393..58438 (+) | 2046 | WP_245024952.1 | DNA helicase UvrD | - |
| MPG66_RS00250 (MPG66_00250) | flgA | 58435..59091 (+) | 657 | WP_245024954.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG66_RS00255 (MPG66_00255) | - | 59101..59664 (+) | 564 | WP_000780125.1 | UbiX family flavin prenyltransferase | - |
| MPG66_RS00260 (MPG66_00260) | coaD | 59664..60137 (+) | 474 | WP_001169260.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG66_RS00265 (MPG66_00265) | tmk | 60139..60714 (+) | 576 | WP_245024956.1 | dTMP kinase | - |
| MPG66_RS00270 (MPG66_00270) | comFC | 60702..61277 (+) | 576 | WP_245024958.1 | ComF family protein | Machinery gene |
| MPG66_RS00275 (MPG66_00275) | - | 61310..63349 (+) | 2040 | WP_245024960.1 | N-6 DNA methylase | - |
| MPG66_RS00280 (MPG66_00280) | - | 63346..64551 (+) | 1206 | WP_245024962.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21256.90 Da Isoelectric Point: 8.7476
>NTDB_id=666175 MPG66_RS00270 WP_245024958.1 60702..61277(+) (comFC) [Helicobacter pylori strain Hpfe124]
MRCLTCLKLSFKPLCLNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILKEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGCLRATNAVSYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCLNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILKEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGCLRATNAVSYAGKSLEFRANNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=666175 MPG66_RS00270 WP_245024958.1 60702..61277(+) (comFC) [Helicobacter pylori strain Hpfe124]
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTTAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTAAAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCACATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGTGTTTAAGGGCGACTAATGCTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGTGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGTACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCATTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTTAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTAAAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCACATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGTGTTTAAGGGCGACTAATGCTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGTGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGTACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCATTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
94.764 |
100 |
0.948 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
38.144 |
100 |
0.387 |