Detailed information NTG0666021

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: MO982_RS23490
• Genome accession: NZ_CP093966
• Coordinates: 5057811..5058683 (+)
• Length: 290 a.a.
• NCBI ID: WP_093976286.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain ATCC BAA-2114
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5052811..5063683

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MO982_RS23475 (MO982_23470)	-	5054194..5054658 (-)	465	WP_021205141.1	pilin	-
MO982_RS23480 (MO982_23475)	pilB	5054889..5056589 (+)	1701	WP_021205142.1	type IV-A pilus assembly ATPase PilB	Machinery gene
MO982_RS23485 (MO982_23480)	pilC	5056593..5057810 (+)	1218	WP_003161763.1	type II secretion system F family protein	Machinery gene
MO982_RS23490 (MO982_23485)	pilD	5057811..5058683 (+)	873	WP_093976286.1	type IV prepilin peptidase/methyltransferase PilD	Machinery gene
MO982_RS23495 (MO982_23490)	coaE	5058680..5059291 (+)	612	WP_003112838.1	dephospho-CoA kinase	-
MO982_RS23500 (MO982_23495)	yacG	5059288..5059488 (+)	201	WP_003094656.1	DNA gyrase inhibitor YacG	-
MO982_RS23505 (MO982_23500)	-	5059525..5059734 (-)	210	WP_003094660.1	hypothetical protein	-
MO982_RS23510 (MO982_23505)	-	5059840..5060529 (-)	690	WP_003103868.1	energy-coupling factor ABC transporter permease	-
MO982_RS23515 (MO982_23510)	-	5060526..5060996 (-)	471	WP_003103866.1	hypothetical protein	-
MO982_RS23520 (MO982_23515)	-	5060993..5061418 (-)	426	WP_003103865.1	GNAT family N-acetyltransferase	-
MO982_RS23525 (MO982_23520)	-	5061551..5062180 (+)	630	WP_003094668.1	DUF1780 domain-containing protein	-
MO982_RS23530 (MO982_23525)	-	5062177..5062626 (+)	450	WP_003094670.1	MOSC domain-containing protein	-
MO982_RS23535 (MO982_23530)	-	5062652..5062822 (+)	171	WP_003094672.1	DUF3094 family protein	-

Sequence

Protein

• Length: 290 a.a.
• Molecular weight: 31783.78 Da
• Isoelectric Point: 7.7068

>NTDB_id=666021 MO982_RS23490 WP_093976286.1 5057811..5058683(+) (pilD) [Pseudomonas aeruginosa strain ATCC BAA-2114]
MTLLDYLASHPLAFVLCAILLGLLVGSFLNVVVHRLPKMMERNWKAEAREALGLEPEPKQATYNLVLPNSACPRCGHEIR
PWENIPLVSYLALGGKCSSCKAAIGKRYPLVELATALLSGYVAWHFGFTWQAGAMLLLTWGLLAMSLIDADHQLLPDVLV
LPLLWLGLIANHSGLFASLDDALFGAVFGYLSLWSVFWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSLVG
AILGVIMLRLRNAESGTPIPFGPYLAIAGWIALLWGDQITRTYLQFAGFK

Nucleotide

• Length: 873 bp

>NTDB_id=666021 MO982_RS23490 WP_093976286.1 5057811..5058683(+) (pilD) [Pseudomonas aeruginosa strain ATCC BAA-2114]
ATGACCCTCCTCGACTACCTGGCCAGCCATCCGCTGGCCTTTGTCTTGTGCGCTATCCTCCTTGGCCTGCTGGTTGGCAG
CTTCCTCAACGTCGTCGTGCATCGCCTGCCGAAGATGATGGAGCGCAACTGGAAGGCCGAGGCCCGCGAAGCGCTCGGGC
TGGAGCCGGAACCCAAGCAGGCGACCTACAACCTGGTGCTGCCGAATTCGGCGTGCCCGCGCTGCGGCCACGAGATCCGC
CCCTGGGAAAACATCCCGCTGGTCAGCTACCTGGCGCTGGGCGGCAAGTGCTCGTCCTGCAAGGCCGCCATCGGCAAACG
CTACCCCCTGGTGGAACTGGCCACCGCGCTGCTTTCCGGCTACGTCGCCTGGCATTTCGGCTTCACCTGGCAGGCGGGCG
CGATGCTCCTGCTGACCTGGGGCCTGCTGGCGATGAGCCTGATCGATGCCGATCACCAACTGCTGCCGGACGTGCTGGTG
CTACCGCTGCTCTGGCTGGGCCTGATCGCCAACCATTCCGGCCTCTTCGCCAGCCTCGACGATGCGCTGTTCGGCGCGGT
GTTCGGCTACCTGAGCCTGTGGTCGGTGTTCTGGCTGTTCAAGCTGGTGACCGGCAAGGAGGGCATGGGCTACGGCGACT
TCAAGCTGCTGGCCATGCTCGGTGCCTGGGGCGGCTGGCAGATCCTGCCGCTGACCATCCTGCTGTCGTCGCTGGTCGGG
GCGATCCTCGGGGTGATCATGCTGCGCCTGCGCAACGCCGAAAGCGGCACGCCGATCCCCTTCGGTCCCTATCTGGCGAT
TGCCGGGTGGATTGCTTTGCTCTGGGGTGATCAAATAACCCGGACCTATCTGCAATTCGCCGGATTCAAATGA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (137-245)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (20-126)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	55.714	96.552	0.538
pilD	Vibrio campbellii strain DS40M4	53.004	97.586	0.517
pilD	Acinetobacter nosocomialis M2	50.177	97.586	0.49
pilD	Acinetobacter baumannii D1279779	50.177	97.586	0.49
pilD	Neisseria gonorrhoeae MS11	49.281	95.862	0.472