Detailed information NTG0665974

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG355_RS13875
• Genome accession: NZ_CP108731
• Coordinates: 3120255..3121553 (-)
• Length: 432 a.a.
• NCBI ID: WP_072483632.1
• Uniprot ID: A0A1K1UXB1
• Organism: Streptomyces sp. NBC_00987
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3115255..3126553

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG355_RS13855 (OG355_13885)	-	3115355..3115837 (+)	483	WP_124717724.1	response regulator	-
OG355_RS13860 (OG355_13890)	-	3115876..3116328 (+)	453	WP_241196339.1	hypothetical protein	-
OG355_RS13865 (OG355_13895)	-	3116399..3119020 (-)	2622	WP_124717723.1	valine--tRNA ligase	-
OG355_RS13870 (OG355_13900)	-	3119161..3120186 (+)	1026	WP_124717722.1	hypothetical protein	-
OG355_RS13875 (OG355_13905)	clpX	3120255..3121553 (-)	1299	WP_072483632.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG355_RS13880 (OG355_13910)	clpP	3121711..3122394 (-)	684	WP_124717721.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG355_RS13885 (OG355_13915)	-	3122472..3123077 (-)	606	WP_164495234.1	ATP-dependent Clp protease proteolytic subunit	-
OG355_RS13890 (OG355_13920)	tig	3123343..3124749 (-)	1407	WP_124717719.1	trigger factor	-
OG355_RS13905 (OG355_13935)	-	3125405..3125599 (-)	195	WP_124717718.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47229.03 Da
• Isoelectric Point: 4.8824

>NTDB_id=665974 OG355_RS13875 WP_072483632.1 3120255..3121553(-) (clpX) [Streptomyces sp. NBC_00987]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=665974 OG355_RS13875 WP_072483632.1 3120255..3121553(-) (clpX) [Streptomyces sp. NBC_00987]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGTAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAAGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGCGCAGGGCCG
TGACGACGCCATCGAACTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACCGGCTCCGGCAAGACGCTGCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAAGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCCGGCCTGGAGCGGATCATCGAGTCCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCGAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGGCTGCCCGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGTTGCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGGGGCCTGC
GGGCCATCATGGAGGAGGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCCGACGTCGTCCGCAACAACGTGAACCCGACCCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGCGACGGCGGGCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

3D structure

• AlphaFold DB: A0A1K1UXB1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509