Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   SCSC_RS07405 Genome accession   NZ_AP014647
Coordinates   1502118..1503884 (-) Length   588 a.a.
NCBI ID   WP_006270248.1    Uniprot ID   A0AAD2Y490
Organism   Streptococcus constellatus subsp. constellatus strain CCUG 24889     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1497118..1508884
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCSC_RS07385 (SCSC_1517) - 1497982..1499379 (+) 1398 WP_006270205.1 glycoside hydrolase family 1 protein -
  SCSC_RS07390 (SCSC_1518) - 1499513..1499833 (-) 321 WP_003031767.1 PTS cellobiose transporter subunit IIA -
  SCSC_RS07395 (SCSC_1519) - 1499844..1500158 (-) 315 WP_006270249.1 PTS cellobiose transporter subunit IIB -
  SCSC_RS07400 (SCSC_1520) rcrQ 1500368..1502128 (-) 1761 WP_006270213.1 ABC transporter ATP-binding protein Regulator
  SCSC_RS07405 (SCSC_1521) rcrP 1502118..1503884 (-) 1767 WP_006270248.1 ABC transporter ATP-binding protein Regulator
  SCSC_RS07410 (SCSC_1522) - 1503877..1504335 (-) 459 WP_006270314.1 MarR family winged helix-turn-helix transcriptional regulator -
  SCSC_RS07415 (SCSC_1523) - 1504506..1505693 (-) 1188 WP_006270250.1 NADH-dependent flavin oxidoreductase -
  SCSC_RS07420 (SCSC_1524) - 1505960..1506370 (-) 411 WP_006268326.1 peptide deformylase -
  SCSC_RS07425 (SCSC_1525) scrK 1506436..1507335 (-) 900 WP_006270296.1 fructokinase ScrK -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65270.14 Da        Isoelectric Point: 7.4108

>NTDB_id=66576 SCSC_RS07405 WP_006270248.1 1502118..1503884(-) (rcrP) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
MVKLFKRLTVKEVGMIIISILFTCLAVYLDLEVPTYISKITELLQTKGTVVSDLWNPGLKMIGLSFASFLSAVVVGFIAA
RLAASFTTSLRSDIFNRVLDYSNAEIKRFSIPSLLTRTTNDLTQIQLMITMGLQVVTRGPIMAIWAITKIIGKSEYWLWA
VIVAIIVNMIMTTVLMTLAFPKQSVIQRLTDKLNSITRESLTGIRVVRAYNAEDYQDDKFAGANAEVTRLNLFVSRLMAI
LNPIMMGISSGLTLAIYWIGAYLIQDAVLPGRLPIFSDMVVFMSYAMQVVMGFMLMAALFIVLPRTLVSAGRINEVLDLH
STIESPMQPKTAKDVKGEVVFDNVSFRYTKNSEAVIEHVSFTAKAGETVAFIGSTGSGKSTLISLIPRFYDVTEGRILVD
GVNVKDYQLEDLHNKVGYIPQKAVLFSGDIKSNLDFGQSNESPLDDEKMWPALDLAQAKSFVEEKEGGLHSEVAQSGTNF
SGGQKQRLSIARALARKPEILIFDDSFSELDYKTDRILREELAKKVKATTRLIVAQRISTIMDADQILVLDKGKVVGQGT
HKELLATNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=66576 SCSC_RS07405 WP_006270248.1 1502118..1503884(-) (rcrP) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
ATGGTTAAATTGTTTAAACGTTTAACTGTCAAAGAAGTAGGGATGATTATCATCAGTATCTTATTTACTTGTTTGGCAGT
TTATTTGGACTTAGAGGTTCCAACCTATATTTCAAAAATTACGGAACTCCTACAGACGAAAGGAACGGTCGTTTCTGATT
TGTGGAATCCGGGCTTGAAAATGATTGGATTGTCATTTGCTAGTTTTCTCAGTGCTGTGGTAGTTGGTTTTATTGCGGCT
AGATTGGCAGCTAGCTTTACAACGAGCTTGCGCTCAGATATTTTCAATCGTGTACTGGATTATTCAAATGCTGAGATTAA
GAGATTTTCTATTCCAAGTCTTTTAACGCGGACAACCAATGATCTTACGCAAATTCAGCTTATGATTACTATGGGCTTGC
AAGTCGTGACTCGTGGGCCGATTATGGCGATTTGGGCGATTACAAAAATCATTGGGAAATCAGAATACTGGCTGTGGGCA
GTTATTGTCGCAATTATTGTGAATATGATTATGACGACAGTTTTGATGACGTTGGCCTTTCCAAAGCAATCTGTTATTCA
ACGGTTGACTGATAAGTTAAATAGTATTACGCGTGAAAGTCTAACAGGGATTCGTGTTGTTCGAGCTTACAATGCTGAAG
ACTATCAAGATGATAAATTTGCAGGGGCAAATGCTGAAGTGACTCGGTTGAATCTCTTTGTTAGTCGGCTCATGGCTATT
TTAAATCCAATTATGATGGGGATTTCGAGTGGTTTGACCTTGGCAATATACTGGATTGGTGCTTACTTGATTCAAGATGC
AGTTTTACCAGGACGTTTGCCAATCTTTAGCGACATGGTTGTCTTTATGTCTTATGCTATGCAGGTCGTAATGGGCTTCA
TGCTCATGGCTGCTCTGTTTATCGTTCTTCCTCGTACCTTGGTGTCTGCGGGGCGGATTAATGAGGTACTTGATTTGCAT
TCAACGATTGAATCTCCAATGCAACCCAAAACAGCTAAAGATGTCAAAGGTGAAGTGGTATTTGACAATGTTTCTTTCCG
CTATACTAAAAACTCTGAGGCTGTCATTGAACATGTTAGCTTTACAGCTAAAGCGGGCGAAACGGTGGCTTTCATCGGAT
CAACTGGTTCTGGAAAGTCAACTTTAATCAGTTTAATTCCTCGTTTTTATGATGTGACAGAAGGAAGAATTTTAGTAGAT
GGAGTAAACGTTAAAGATTATCAGCTAGAAGATTTGCATAATAAAGTTGGCTACATTCCACAAAAAGCTGTCCTCTTCTC
TGGTGATATAAAGAGTAATTTAGACTTTGGACAAAGTAATGAAAGTCCCTTAGATGATGAAAAAATGTGGCCTGCGTTAG
ACTTGGCACAAGCGAAATCATTTGTTGAAGAAAAAGAAGGTGGTCTGCACTCAGAGGTTGCACAAAGCGGAACCAATTTC
TCTGGAGGTCAAAAGCAGCGGCTGTCGATTGCACGTGCACTTGCTAGGAAACCTGAAATTCTGATTTTTGACGATTCATT
TTCAGAACTGGACTATAAGACAGACCGTATTTTGCGAGAAGAATTGGCGAAAAAAGTGAAAGCTACAACCAGATTGATCG
TAGCTCAGCGGATTTCAACGATCATGGATGCTGATCAGATCTTGGTGTTGGATAAAGGGAAAGTTGTTGGGCAAGGAACT
CACAAAGAGCTGCTAGCGACAAACGAAGTTTATCAAGAAATTGCTTACTCACAATTATCAAAGGAGGAATTGGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(16-291)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

70.333

100

0.718

Multiple sequence alignment