Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   MPM52_RS04825 Genome accession   NZ_CP093930
Coordinates   982532..983518 (+) Length   328 a.a.
NCBI ID   WP_000959282.1    Uniprot ID   A0A7U7EXT8
Organism   Staphylococcus aureus strain WA121-2010_15611     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 977532..988518
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MPM52_RS04800 (MPM52_04800) opp4B 977746..978708 (+) 963 WP_000915997.1 oligopeptide ABC transporter permease -
  MPM52_RS04805 (MPM52_04805) opp4C 978720..979601 (+) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  MPM52_RS04810 (MPM52_04810) trpS 979643..980632 (-) 990 WP_103150204.1 tryptophan--tRNA ligase -
  MPM52_RS04815 (MPM52_04815) spxA 980926..981321 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  MPM52_RS04820 (MPM52_04820) mecA 981692..982411 (+) 720 WP_103150203.1 adaptor protein MecA -
  MPM52_RS04825 (MPM52_04825) coiA 982532..983518 (+) 987 WP_000959282.1 competence protein CoiA family protein Machinery gene
  MPM52_RS04830 (MPM52_04830) pepF 983566..985374 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  MPM52_RS04835 (MPM52_04835) yjbH 985834..986640 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  MPM52_RS04840 (MPM52_04840) - 986663..987028 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  MPM52_RS04845 (MPM52_04845) - 987132..987725 (-) 594 WP_000224619.1 CYTH domain-containing protein -
  MPM52_RS04850 (MPM52_04850) - 987911..988258 (+) 348 WP_001242103.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38878.55 Da        Isoelectric Point: 9.5714

>NTDB_id=665619 MPM52_RS04825 WP_000959282.1 982532..983518(+) (coiA) [Staphylococcus aureus strain WA121-2010_15611]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFHSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVYNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=665619 MPM52_RS04825 WP_000959282.1 982532..983518(+) (coiA) [Staphylococcus aureus strain WA121-2010_15611]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCTGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCATAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGTACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7EXT8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

100

100

1
  coiA Staphylococcus aureus MW2

97.561

100

0.976