Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG623_RS19255 Genome accession   NZ_CP108688
Coordinates   4258269..4259393 (-) Length   374 a.a.
NCBI ID   WP_406147977.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01012     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4253269..4264393
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG623_RS19230 (OG623_19160) cseB 4254041..4254751 (-) 711 WP_406147970.1 two-component system response regulator CseB -
  OG623_RS19235 (OG623_19165) - 4254764..4255375 (-) 612 WP_406147971.1 hypothetical protein -
  OG623_RS19240 (OG623_19170) - 4255447..4256031 (-) 585 WP_406147972.1 SigE family RNA polymerase sigma factor -
  OG623_RS19245 (OG623_19175) - 4256214..4257116 (-) 903 WP_406147974.1 A/G-specific adenine glycosylase -
  OG623_RS19250 (OG623_19180) - 4257371..4258216 (+) 846 WP_406147976.1 hypothetical protein -
  OG623_RS19255 (OG623_19185) disA 4258269..4259393 (-) 1125 WP_406147977.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG623_RS19260 (OG623_19190) radA/sms 4259474..4260886 (-) 1413 WP_406147978.1 DNA repair protein RadA Machinery gene
  OG623_RS19265 (OG623_19195) - 4261098..4262909 (+) 1812 WP_406147979.1 BACON domain-containing protein -
  OG623_RS19270 (OG623_19200) - 4263027..4263866 (-) 840 WP_406147981.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40338.27 Da        Isoelectric Point: 4.9440

>NTDB_id=665367 OG623_RS19255 WP_406147977.1 4258269..4259393(-) (disA) [Streptomyces sp. NBC_01012]
MAANDRAASPGKSGQGTGNEALMRASLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFAATRLR
ELCKLDGAMILDKEMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVSQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTARRSRTVAEALAELDTLTHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=665367 OG623_RS19255 WP_406147977.1 4258269..4259393(-) (disA) [Streptomyces sp. NBC_01012]
GTGGCAGCCAACGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACGGGGAACGAGGCGCTGATGCGCGCCTCGTT
GAGCGCTGTCGCGCCCGGAACTGCCCTCCGGGACGGCCTGGAGCGCATCCTCCGTGGCAATACCGGTGGACTGATCGTCC
TCGGCATGGACAAAACCGTCGAATCCATGTGTACCGGCGGCTTCGTGCTGGACGTGGAGTTCGCCGCGACGCGCCTGCGC
GAACTGTGCAAGCTGGACGGCGCGATGATCCTCGACAAGGAGATGACCAAGATCCTCCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACGGGCACCCGCCACCGCACGGCGGACCGCGTCTCCAAGGCGTGCGGCTTCCCCG
TGGTGTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTGTCCCGCGCCAACCAGGCGCTCGCCACCCTGGAGCGGTACAAGCTCAGGCTCGACGAGGTCGCCGGGACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTCACCGCGGTCTCGCAGCGTCTCGAGATGGTGCGCCGCATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGTCTTCTGGCGCTCCAGCTGGACGAGTTGATCGCC
GGCGTGGAGCCGGAGCGCGAGCTGGTCGTCCGCGACTACGTCCCCGAACCCACCGCGAGGCGGTCCCGTACGGTCGCGGA
AGCGCTGGCCGAGCTGGACACGCTCACCCACACCGAGCTGCTGGAACTCCCCGTGGTGGCACGGGCGCTGGGCTACAGCG
GCTCGCCCGAGACGCTGGACTCGGCCGTCTCCCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGAGCG
ATCATCGAGCGCCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTCCAGACCGTGGA
CGGGGTCGGCGAGGCACGGGCCAGGAGCGTCCGCGAGGGACTCTCGCGGCTCGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436