Detailed information NTG0665232

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG282_RS23235
• Genome accession: NZ_CP108685
• Coordinates: 5291320..5292612 (+)
• Length: 430 a.a.
• NCBI ID: WP_250298433.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01014
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5286320..5297612

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG282_RS23205 (OG282_23140)	-	5287447..5287641 (+)	195	WP_250298436.1	hypothetical protein	-
OG282_RS23220 (OG282_23155)	tig	5288128..5289531 (+)	1404	WP_406115216.1	trigger factor	-
OG282_RS23225 (OG282_23160)	-	5289823..5290428 (+)	606	WP_250298549.1	ATP-dependent Clp protease proteolytic subunit	-
OG282_RS23230 (OG282_23165)	clpP	5290479..5291162 (+)	684	WP_284347844.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG282_RS23235 (OG282_23170)	clpX	5291320..5292612 (+)	1293	WP_250298433.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG282_RS23240 (OG282_23175)	-	5292680..5293699 (-)	1020	WP_326694901.1	hypothetical protein	-
OG282_RS23245 (OG282_23180)	-	5293838..5296459 (+)	2622	WP_266643185.1	valine--tRNA ligase	-
OG282_RS23250 (OG282_23185)	-	5296535..5297548 (-)	1014	WP_250298430.1	rod shape-determining protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47145.90 Da
• Isoelectric Point: 4.7809

>NTDB_id=665232 OG282_RS23235 WP_250298433.1 5291320..5292612(+) (clpX) [Streptomyces sp. NBC_01014]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPSLEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRDNVNPTLVPREPRIVGNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=665232 OG282_RS23235 WP_250298433.1 5291320..5292612(+) (clpX) [Streptomyces sp. NBC_01014]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGGGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAAGAGGAACTCGCGGAGACCT
CCGAAGTGCGGTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCTCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGGACCAACCG
CGAGGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACACTGCTCGCCCAGA
CCCTGGCCCGGATGCTCAACGTCCCGTTCGCCATTGCGGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAGGGCACGACCGCCTCGGTACCGCCGCAGGGCGGCCGTAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCCGGTCTGGAGCGGATCATCGAGTCCCGGGCGGGCGC
GAAGGGCATCGGCTTCGGCGCGACCATCCGTTCCAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTGCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTTCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCGCCCGTCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGGGCGCGTGGGCTGC
GCGCCATCATGGAAGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGACGTCGTCCGGGACAACGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTGGGCAACGACGGCCGCCACGA
GAAGTCCGCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.488	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.155	95.814	0.509