Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG282_RS14010 Genome accession   NZ_CP108685
Coordinates   3300599..3301723 (+) Length   374 a.a.
NCBI ID   WP_250305431.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01014     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3295599..3306723
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG282_RS13995 (OG282_13930) - 3296434..3297240 (+) 807 WP_250305428.1 hypothetical protein -
  OG282_RS14000 (OG282_13935) - 3297280..3298983 (-) 1704 WP_250305429.1 BACON domain-containing protein -
  OG282_RS14005 (OG282_13940) radA/sms 3299145..3300554 (+) 1410 WP_250305430.1 DNA repair protein RadA Machinery gene
  OG282_RS14010 (OG282_13945) disA 3300599..3301723 (+) 1125 WP_250305431.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG282_RS14015 (OG282_13950) - 3301830..3302666 (-) 837 WP_406116428.1 hypothetical protein -
  OG282_RS14020 (OG282_13955) - 3302850..3303458 (+) 609 WP_250305433.1 phosphatase PAP2 family protein -
  OG282_RS14025 (OG282_13960) - 3303475..3304392 (+) 918 WP_406114145.1 A/G-specific adenine glycosylase -
  OG282_RS14030 (OG282_13965) - 3304563..3305114 (+) 552 WP_250305435.1 SigE family RNA polymerase sigma factor -
  OG282_RS14035 (OG282_13970) - 3305102..3305845 (+) 744 WP_406114148.1 hypothetical protein -
  OG282_RS14040 (OG282_13975) cseB 3305858..3306556 (+) 699 WP_250305437.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40288.19 Da        Isoelectric Point: 5.0166

>NTDB_id=665213 OG282_RS14010 WP_250305431.1 3300599..3301723(+) (disA) [Streptomyces sp. NBC_01014]
MAANDRAAPGKSGGSSSGNEALMRATLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVMDVEFAATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALVELNTLSHTELLELPVVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=665213 OG282_RS14010 WP_250305431.1 3300599..3301723(+) (disA) [Streptomyces sp. NBC_01014]
GTGGCAGCCAATGACCGAGCAGCACCCGGGAAGTCCGGCGGGAGCTCCTCCGGCAATGAAGCGCTGATGCGCGCCACGCT
GAGCGCCGTCGCGCCCGGTACAGCGCTGCGCGACGGCCTGGAACGCATCCTTCGCGGGAACACCGGCGGCCTGATCGTCC
TGGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTCATGGACGTGGAGTTCGCCGCGACCCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTCGACAAGGATCTCACCAAGATTCTGCGGGCCGGTGTGCAGCTGGTCCC
GGACGCGTCGATCCCCACCGAGGAGACCGGCACCCGTCACCGCACGGCCGACCGGGTCTCCAAACAGTGCGGTTTCCCGG
TCGTCTCGGTGTCGCAGTCGATGCATCTGATCGCGTTGTACGTCGACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCACTGGCCACGCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTCGCCGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCACGGCCGTGGCGCAGCGGCTGGAGATGGTCCGGCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTGCTCTCCCTCCAGCTCGACGAGCTGATCGCG
GGGGTCGAGCCGGAGCGGGAGCTGGTGGTCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGTTCGCGCACGGTCGCCGA
GGCGCTGGTCGAGCTGAACACGCTCAGCCATACGGAACTTCTCGAACTGCCCGTAGTGGCACGGGCGTTGGGCTACAGCG
GCTCCCCCGAGACGCTCGACTCCGCGGTGTCGCCGCGCGGGTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGAGCG
ATCATCGAGCGGCTGGTCGAGCACTTCGGCGGACTGCAGAAGCTGCTGGCCGCGAGCGTCGACGATCTACAGACGGTGGA
CGGGGTCGGCGAGGCGCGGGCCCGGAGCGTGCGGGAGGGACTGTCGCGGCTCGCGGAGTCCTCGATCCTTGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.328

94.652

0.439