Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   MOW04_RS19240 Genome accession   NZ_CP093546
Coordinates   3720892..3721011 (+) Length   39 a.a.
NCBI ID   WP_041334633.1    Uniprot ID   A0AA96UN30
Organism   Bacillus sp. K1     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3715892..3726011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW04_RS19220 albG 3716056..3716757 (+) 702 WP_120363545.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  MOW04_RS19225 - 3716763..3718139 (-) 1377 WP_120363546.1 YncE family protein -
  MOW04_RS19230 - 3718178..3719533 (-) 1356 WP_163130256.1 YncE family protein -
  MOW04_RS21190 - 3719530..3719760 (-) 231 Protein_3732 hypothetical protein -
  MOW04_RS19235 rapF 3719763..3720908 (+) 1146 WP_086344441.1 response regulator aspartate phosphatase RapF Regulator
  MOW04_RS19240 phrF 3720892..3721011 (+) 120 WP_041334633.1 phosphatase RapF inhibitor PhrF Regulator
  MOW04_RS19245 - 3721125..3721575 (+) 451 Protein_3735 YbaK/EbsC family protein -
  MOW04_RS19250 speB 3721607..3722479 (-) 873 WP_003227545.1 agmatinase -
  MOW04_RS19255 speE 3722540..3723370 (-) 831 WP_003227543.1 spermidine synthase -
  MOW04_RS19260 - 3723572..3725647 (+) 2076 WP_029726084.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4215.16 Da        Isoelectric Point: 9.5675

>NTDB_id=665181 MOW04_RS19240 WP_041334633.1 3720892..3721011(+) (phrF) [Bacillus sp. K1]
MKLKSKLLLSCLALCTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=665181 MOW04_RS19240 WP_041334633.1 3720892..3721011(+) (phrF) [Bacillus sp. K1]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTATGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

97.436

100

0.974
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487