Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFC   Type   Machinery gene
Locus tag   MOW04_RS18140 Genome accession   NZ_CP093546
Coordinates   3511759..3512481 (-) Length   240 a.a.
NCBI ID   WP_003227991.1    Uniprot ID   A0AAE2SKX0
Organism   Bacillus sp. K1     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3506759..3517481
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW04_RS18105 fliW 3506898..3507329 (-) 432 WP_003228007.1 flagellar assembly protein FliW -
  MOW04_RS18110 - 3507350..3507925 (-) 576 WP_014481045.1 DUF6470 family protein -
  MOW04_RS18115 flgL 3507972..3508868 (-) 897 WP_015714797.1 flagellar hook-associated protein FlgL -
  MOW04_RS18120 flgK 3508879..3510402 (-) 1524 WP_163131423.1 flagellar hook-associated protein FlgK -
  MOW04_RS18125 flgN 3510421..3510903 (-) 483 WP_003227999.1 flagellar protein FlgN -
  MOW04_RS18130 flgM 3510919..3511185 (-) 267 WP_128738293.1 flagellar biosynthesis anti-sigma factor FlgM -
  MOW04_RS18135 - 3511266..3511685 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  MOW04_RS18140 comFC 3511759..3512481 (-) 723 WP_003227991.1 comF operon protein ComFC Machinery gene
  MOW04_RS18145 comFB 3512445..3512741 (-) 297 WP_003227989.1 late competence protein ComFB -
  MOW04_RS18150 comFA 3512801..3514192 (-) 1392 WP_003243962.1 ATP-dependent helicase ComFA Machinery gene
  MOW04_RS18155 - 3514298..3515143 (-) 846 WP_128738295.1 DegV family protein -
  MOW04_RS18160 degU 3515241..3515930 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  MOW04_RS18165 degS 3516013..3517170 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator

Sequence

Protein


Download         Length: 240 a.a.        Molecular weight: 27477.75 Da        Isoelectric Point: 9.0021

>NTDB_id=665173 MOW04_RS18140 WP_003227991.1 3511759..3512481(-) (comFC) [Bacillus sp. K1]
MSNEAGGGIHKLICLLCDSQFSQDVTWRALFLLKPDEKVCYSCRSKLKKITGHICPLCGRPQSVHAVCRDCEVWRTRIRD
SLLLRQNRSVYTYNDMMKETLSRFKFRGDAEIINAFKSDFSSTFSKVYPDKHFVLVPIPLSKEREEERGFNQAHLLAECL
DRPSHHPLIRLNNEKQSKKKKTERLLSECIFDTKNNSAEGMNIILIDDLYTTGATLHFAARCLLEKGKAASVSSFTLIRS

Nucleotide


Download         Length: 723 bp        

>NTDB_id=665173 MOW04_RS18140 WP_003227991.1 3511759..3512481(-) (comFC) [Bacillus sp. K1]
ATGTCAAACGAAGCAGGAGGAGGCATTCATAAACTGATCTGTTTATTATGTGATTCGCAATTTTCTCAAGATGTTACATG
GAGAGCCCTTTTTTTACTAAAGCCTGATGAAAAGGTTTGTTATTCTTGCAGAAGCAAATTAAAGAAAATCACAGGACATA
TCTGCCCCCTGTGCGGCAGACCTCAATCTGTTCATGCCGTATGCAGGGATTGCGAGGTGTGGAGAACAAGGATCAGAGAC
AGTTTGCTATTGCGTCAAAACCGTTCAGTTTACACATATAATGATATGATGAAAGAAACGCTCTCCCGTTTTAAATTTAG
AGGAGATGCAGAAATCATAAATGCATTTAAAAGTGATTTTTCTTCAACCTTTTCTAAGGTTTACCCCGATAAGCATTTTG
TTCTTGTACCTATTCCGCTGAGCAAGGAACGGGAAGAAGAGCGCGGATTTAACCAGGCACATCTCTTGGCAGAATGTTTA
GACCGGCCTTCCCACCATCCCCTCATTCGCCTGAATAATGAGAAACAGTCAAAGAAAAAGAAAACAGAACGCCTGCTGTC
AGAGTGCATTTTTGATACAAAAAATAATTCAGCAGAAGGTATGAATATCATTTTAATAGACGATCTTTATACAACAGGCG
CCACCTTGCACTTCGCAGCCCGCTGCTTATTAGAAAAAGGAAAAGCCGCTTCAGTGTCATCTTTTACCTTGATCAGAAGC
TAA

Domains

Predicted by InterproScan.

Double zinc ribbon domain (DZR_2)

(14-71)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFC Bacillus subtilis subsp. subtilis str. 168

100

100

1