Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MOW04_RS16235 Genome accession   NZ_CP093546
Coordinates   3126470..3127114 (-) Length   214 a.a.
NCBI ID   WP_003220716.1    Uniprot ID   -
Organism   Bacillus sp. K1     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3121470..3132114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW04_RS16200 - 3122660..3123091 (+) 432 WP_163131571.1 Na(+)/H(+) antiporter subunit B -
  MOW04_RS16205 - 3123091..3123432 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  MOW04_RS16210 - 3123425..3124906 (+) 1482 WP_163131569.1 Na+/H+ antiporter subunit D -
  MOW04_RS16215 - 3124912..3125388 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  MOW04_RS16220 - 3125388..3125672 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  MOW04_RS16225 mnhG 3125656..3126030 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  MOW04_RS16230 - 3126071..3126451 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  MOW04_RS16235 comA 3126470..3127114 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  MOW04_RS16240 comP 3127195..3129483 (-) 2289 WP_163131567.1 histidine kinase Regulator
  MOW04_RS16245 comX 3129495..3129659 (-) 165 WP_015384519.1 competence pheromone ComX -
  MOW04_RS16250 - 3129672..3130532 (-) 861 WP_163131565.1 polyprenyl synthetase family protein -
  MOW04_RS16255 degQ 3130717..3130857 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  MOW04_RS16260 - 3131079..3131204 (+) 126 WP_003228793.1 hypothetical protein -
  MOW04_RS16265 - 3131318..3131686 (+) 369 WP_014477834.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24128.51 Da        Isoelectric Point: 4.6857

>NTDB_id=665168 MOW04_RS16235 WP_003220716.1 3126470..3127114(-) (comA) [Bacillus sp. K1]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=665168 MOW04_RS16235 WP_003220716.1 3126470..3127114(-) (comA) [Bacillus sp. K1]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATCTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATCCTTCAAGAAGTTGAAAAAGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

100

100

1