Detailed information NTG0665040

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG372_RS11155
• Genome accession: NZ_CP108681
• Coordinates: 2477214..2478506 (-)
• Length: 430 a.a.
• NCBI ID: WP_266857025.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01020
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2472214..2483506

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG372_RS11145 (OG372_11165)	-	2473311..2475932 (-)	2622	WP_405912259.1	valine--tRNA ligase	-
OG372_RS11150 (OG372_11170)	-	2476071..2477093 (+)	1023	WP_401599920.1	hypothetical protein	-
OG372_RS11155 (OG372_11175)	clpX	2477214..2478506 (-)	1293	WP_266857025.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG372_RS11160 (OG372_11180)	clpP	2478663..2479346 (-)	684	WP_164261167.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG372_RS11165 (OG372_11185)	clpP	2479399..2480016 (-)	618	WP_323183829.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG372_RS11170 (OG372_11190)	tig	2480299..2481693 (-)	1395	WP_266857021.1	trigger factor	-
OG372_RS11185 (OG372_11205)	-	2482297..2482491 (-)	195	WP_164261160.1	hypothetical protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47072.85 Da
• Isoelectric Point: 4.7809

>NTDB_id=665040 OG372_RS11155 WP_266857025.1 2477214..2478506(-) (clpX) [Streptomyces sp. NBC_01020]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGASREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRDNVNPTLVPREPRIVGNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=665040 OG372_RS11155 WP_266857025.1 2477214..2478506(-) (clpX) [Streptomyces sp. NBC_01020]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGGGTGTACATCTGCGACGAGTGCATTGATCTCTGCAACGAGATCATTGAGGAAGAGCTCGCGGAGACCT
CCGAAGTGCGGTGGGAGGAACTGCCCAAACCGCGCGAGATCTATGAGTTCCTTGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGCGCCAGCCG
CGAGGACGCGATCGAACTCGCCAAGTCCAACATCCTGCTGCTGGGTCCCACCGGCTCCGGCAAGACGCTGCTCGCCCAGA
CGCTGGCCCGGATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACAGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCGTCGGTGCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACCACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGTCTGGAGCGGATCATCGAGTCCCGGGCGGGCGC
GAAGGGCATCGGCTTCGGCGCCACCATCCGCTCCAAGCGGGAGATCGAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCCTGACGTCGGTGCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTGGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGTCCCGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGGGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGACGTCGTCCGGGACAACGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTCGGCAACGACGGACGGCACGA
GAAGTCCGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.772	93.721	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.814	0.512