Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG393_RS17610 Genome accession   NZ_CP108677
Coordinates   3989925..3991049 (-) Length   374 a.a.
NCBI ID   WP_327375611.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01216     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3984925..3996049
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG393_RS17585 (OG393_17615) - 3985683..3986291 (-) 609 WP_327378463.1 hypothetical protein -
  OG393_RS17590 (OG393_17620) - 3986372..3986938 (-) 567 WP_327375607.1 SigE family RNA polymerase sigma factor -
  OG393_RS17595 (OG393_17625) - 3987170..3988114 (-) 945 WP_327375608.1 A/G-specific adenine glycosylase -
  OG393_RS17600 (OG393_17630) - 3988137..3988799 (-) 663 WP_327375609.1 phosphatase PAP2 family protein -
  OG393_RS17605 (OG393_17635) - 3988988..3989815 (+) 828 WP_327375610.1 hypothetical protein -
  OG393_RS17610 (OG393_17640) disA 3989925..3991049 (-) 1125 WP_327375611.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG393_RS17615 (OG393_17645) radA/sms 3991276..3992679 (-) 1404 WP_327375612.1 DNA repair protein RadA Machinery gene
  OG393_RS17620 (OG393_17650) - 3992853..3994568 (+) 1716 WP_327375613.1 hypothetical protein -
  OG393_RS17625 (OG393_17655) - 3994699..3995553 (-) 855 WP_327375614.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40233.14 Da        Isoelectric Point: 5.0196

>NTDB_id=664993 OG393_RS17610 WP_327375611.1 3989925..3991049(-) (disA) [Streptomyces sp. NBC_01216]
MAAKDGAAAPGKSGAGSGNEALMRASLSAVAPGTALRDGLERILRGNTGGLLVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSRQCNFPVVSVSQSMRLIALYVNGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVIRDYVPEPTAKRSRTVSEALTELDALSHAELLELAIVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=664993 OG393_RS17610 WP_327375611.1 3989925..3991049(-) (disA) [Streptomyces sp. NBC_01216]
GTGGCAGCCAAGGACGGGGCAGCAGCTCCCGGAAAGTCCGGCGCGGGCTCCGGCAACGAAGCGCTCATGCGCGCGTCACT
CAGCGCCGTCGCCCCCGGCACCGCCCTGCGCGACGGTCTTGAGCGGATCCTCCGGGGCAACACCGGCGGGCTGCTCGTCC
TCGGCATGGACAAGACGGTGGAATCCATGTGCACCGGCGGTTTCGTGCTGGACGTCGAGTTCACCGCGACCCGGTTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTCCC
GGACGCGTCCATCCCGACCGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGCGTCTCCCGGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCCATGCGCCTGATCGCCCTCTACGTCAACGGCGAGCGCCGGGTCCTGGAGGAGTCGGCCGCG
ATCCTCTCGCGCGCCAACCAGGCCCTCGCGACGCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTCGCGGGCACCCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACCGTGCGGGACGTCACCGCGGTCGCCCAGCGCCTGGAGATGGTCCGCAGGATCG
CCACCGAGATCGCCGAGTACGTGGTCGAACTCGGCACCGACGGCCGTCTCCTCTCCCTCCAGCTCGACGAGCTGATCGCG
GGCGTCGAGCCCGAGCGCGAGCTGGTCATCCGCGACTACGTGCCGGAGCCGACCGCCAAGCGCTCGCGCACGGTGAGTGA
GGCGCTGACCGAACTGGACGCGCTCAGCCACGCCGAGCTGCTCGAACTCGCCATCGTGGCGCGGGCGCTGGGCTACAGCG
GCTCCCCCGAGACGCTCGACTCCGCCGTCTCGCCACGCGGCTACCGGCTGCTGGCCAAGGTCCCGCGACTGCCGGGAGCC
ATCATCGAACGGCTCGTGGAGCACTTCGGCGGGCTCCAGAAGCTGCTGGCGGCCAGCGTCGACGACCTGCAGACCGTCGA
CGGCGTCGGCGAGGCCCGGGCCCGCAGCGTCCGTGAGGGCCTCTCCCGGCTCGCCGAGTCCTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441