Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG316_RS20740 Genome accession   NZ_CP108674
Coordinates   4713272..4714396 (+) Length   374 a.a.
NCBI ID   WP_326736926.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01022     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4708272..4719396
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG316_RS20725 (OG316_20790) - 4708717..4709565 (+) 849 WP_326736923.1 hypothetical protein -
  OG316_RS20730 (OG316_20795) - 4709580..4711550 (-) 1971 WP_326736924.1 hypothetical protein -
  OG316_RS20735 (OG316_20800) radA/sms 4711736..4713148 (+) 1413 WP_326736925.1 DNA repair protein RadA Machinery gene
  OG316_RS20740 (OG316_20805) disA 4713272..4714396 (+) 1125 WP_326736926.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG316_RS20745 (OG316_20810) - 4714473..4715270 (-) 798 WP_326740657.1 hypothetical protein -
  OG316_RS20750 (OG316_20815) - 4715648..4716550 (+) 903 WP_326736927.1 A/G-specific adenine glycosylase -
  OG316_RS20755 (OG316_20820) - 4716770..4717414 (+) 645 WP_326736928.1 SigE family RNA polymerase sigma factor -
  OG316_RS20760 (OG316_20825) - 4717402..4718145 (+) 744 WP_326736929.1 hypothetical protein -
  OG316_RS20765 (OG316_20830) cseB 4718156..4718860 (+) 705 WP_326736930.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40316.18 Da        Isoelectric Point: 4.9352

>NTDB_id=664912 OG316_RS20740 WP_326736926.1 4713272..4714396(+) (disA) [Streptomyces sp. NBC_01022]
MAASDRAASPGKSGQGTGNEALMRASLTAVAPGRALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASISTEETGTRHRTADRVSKQCNFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRLIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=664912 OG316_RS20740 WP_326736926.1 4713272..4714396(+) (disA) [Streptomyces sp. NBC_01022]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GACCGCCGTCGCGCCCGGAAGGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAAAACCGTCGAGTCGATGTGCACGGGCGGCTTCGTGCTGGACGTGGAATTCACCGCGACCCGGCTGCGT
GAGCTCGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGTGTCCAGTTGGTCCC
GGACGCCTCGATCTCCACCGAGGAGACGGGCACCCGTCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCACCTCATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGGGCCAATCAGGCACTCGCCACGCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTCGCGGGCACGCTCTC
CGCACTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCCGTCGCCCAGCGGCTGGAGATGGTCCGGCTGATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTCGGGACCGACGGCCGGCTTCTCTCGCTCCAGCTGGACGAGTTGATCGCC
GGAGTGGAGCCGGAGCGCGAGCTGGTCGTGCGCGACTACGTGCCGGAGCCGACGGCGAAGCGCTCGCGCACGGTGGCGGA
GGCGCTCACCGAGCTGGACGCGCTCTCCCACACCGAGCTGCTCGAACTCCCGGTCGTGGCAAGGGCGCTGGGATACAGCG
GCTCCCCGGAGACGCTCGACTCGGCGGTGTCCCCACGCGGTTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCAAGCGTCGACGATCTCCAGACAGTGGA
CGGCGTCGGTGAGGCACGGGCCCGCAGCGTGCGCGAGGGGCTGTCGCGGCTGGCCGAGTCGTCGATTCTCGAACGGTACG
TGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436