Detailed information NTG0664858

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG217_RS25985
• Genome accession: NZ_CP108671
• Coordinates: 5765497..5766789 (+)
• Length: 430 a.a.
• NCBI ID: WP_266857025.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01023
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5760497..5771789

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG217_RS25955 (OG217_25975)	-	5761509..5761703 (+)	195	WP_164261160.1	hypothetical protein	-
OG217_RS25970 (OG217_25990)	tig	5762314..5763705 (+)	1392	WP_328326547.1	trigger factor	-
OG217_RS25975 (OG217_25995)	clpP	5763988..5764605 (+)	618	WP_323183829.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG217_RS25980 (OG217_26000)	clpP	5764657..5765340 (+)	684	WP_164261167.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG217_RS25985 (OG217_26005)	clpX	5765497..5766789 (+)	1293	WP_266857025.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG217_RS25990 (OG217_26010)	-	5766899..5767921 (-)	1023	WP_406154481.1	hypothetical protein	-
OG217_RS25995 (OG217_26015)	-	5768059..5770680 (+)	2622	WP_328326541.1	valine--tRNA ligase	-
OG217_RS26000 (OG217_26020)	-	5770747..5771760 (-)	1014	WP_328326539.1	rod shape-determining protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47072.85 Da
• Isoelectric Point: 4.7809

>NTDB_id=664858 OG217_RS25985 WP_266857025.1 5765497..5766789(+) (clpX) [Streptomyces sp. NBC_01023]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGASREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRDNVNPTLVPREPRIVGNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=664858 OG217_RS25985 WP_266857025.1 5765497..5766789(+) (clpX) [Streptomyces sp. NBC_01023]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGGGTGTACATCTGCGACGAGTGCATTGATCTCTGCAACGAGATCATTGAGGAAGAGCTCGCGGAGACCT
CCGAAGTGCGGTGGGAGGAACTGCCCAAACCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGCGCCAGCCG
CGAGGACGCGATCGAACTCGCCAAGTCCAACATCCTGTTGCTGGGCCCCACCGGCTCCGGCAAGACGCTGCTCGCCCAGA
CACTGGCCCGGATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACCGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGTGATGTCTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCTTCGGTGCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACCACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGTCTTGAGCGGATCATCGAGTCCCGGGCGGGCGC
GAAGGGCATCGGCTTCGGCGCGACCATCCGCTCCAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGATCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTTCTGACCTCGGTGCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTGGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGTCCCGCGCTTGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGGGCGCGCGGTCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGATGTCGTCCGGGACAACGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTCGGCAACGACGGGCGTCACGA
GAAGTCCGCCTGA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.772	93.721	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.814	0.512