Detailed information NTG0664851

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: MO415_RS21515
• Genome accession: NZ_CP093471
• Coordinates: 4415571..4416371 (+)
• Length: 266 a.a.
• NCBI ID: WP_004191960.1
• Uniprot ID: A0AAJ5B1F9
• Organism: Klebsiella pneumoniae strain VA591
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4410571..4421371

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MO415_RS21480 (MO415_21455)	gspH	4410727..4411242 (+)	516	WP_101972054.1	type II secretion system minor pseudopilin GspH	-
MO415_RS21485 (MO415_21460)	gspI	4411239..4411604 (+)	366	WP_002889025.1	type II secretion system minor pseudopilin GspI	-
MO415_RS21490 (MO415_21465)	gspJ	4411601..4412197 (+)	597	WP_032411156.1	type II secretion system minor pseudopilin GspJ	-
MO415_RS21495 (MO415_21470)	gspK	4412194..4413180 (+)	987	WP_101972053.1	type II secretion system minor pseudopilin GspK	-
MO415_RS21500 (MO415_21475)	gspL	4413167..4414360 (+)	1194	WP_087830065.1	type II secretion system protein GspL	-
MO415_RS21505 (MO415_21480)	-	4414353..4414838 (+)	486	WP_004145896.1	type II secretion system protein M	-
MO415_RS21510 (MO415_21485)	-	4414828..4415574 (+)	747	WP_004145897.1	type II secretion system protein N	-
MO415_RS21515 (MO415_21490)	pilD	4415571..4416371 (+)	801	WP_004191960.1	A24 family peptidase	Machinery gene
MO415_RS21520 (MO415_21495)	hrpB	4416419..4418848 (-)	2430	WP_101972052.1	ATP-dependent helicase HrpB	-
MO415_RS21525 (MO415_21500)	thpR	4418921..4419457 (+)	537	WP_004177389.1	RNA 2',3'-cyclic phosphodiesterase	-
MO415_RS21530 (MO415_21505)	sfsA	4419457..4420173 (+)	717	WP_002888848.1	DNA/RNA nuclease SfsA	-
MO415_RS21535 (MO415_21510)	dksA	4420336..4420791 (+)	456	WP_002888845.1	RNA polymerase-binding protein DksA	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29403.04 Da
• Isoelectric Point: 8.8894

>NTDB_id=664851 MO415_RS21515 WP_004191960.1 4415571..4416371(+) (pilD) [Klebsiella pneumoniae strain VA591]
MTTLAALSLHFPFVWYGFLLLFGLALGSFYNVVIYRLPRMLTQTADDERITLSTPGSSCPQCRQPIAWRDNIPLLSFLWL
GRRARCCQAPIAWSYPLTELATGLLFILAGALLAPGLPLAGGLVLLSFLLILARIDARTQLLPDRLTLPLLWAGLLFNLN
EVYIALPDAVAGAMAGYLALWSVYWLFRLLTGKEALGYGDFKLLAALGAWCGWQVLPQVLLLASASGLVWTLLQRLWTRQ
SLQQPLAFGPWLALAGGGIFLWQQMI

Nucleotide

• Length: 801 bp

>NTDB_id=664851 MO415_RS21515 WP_004191960.1 4415571..4416371(+) (pilD) [Klebsiella pneumoniae strain VA591]
ATGACGACACTAGCCGCGTTATCGCTGCACTTTCCCTTTGTCTGGTATGGCTTTCTACTGCTGTTCGGCCTGGCGCTGGG
CAGCTTTTACAATGTGGTGATCTATCGTCTGCCGCGCATGTTGACCCAGACCGCGGACGACGAGCGGATAACCCTCAGCA
CCCCGGGCTCTTCCTGCCCGCAGTGCCGCCAGCCGATCGCCTGGCGGGACAATATCCCGCTGCTCAGTTTCCTCTGGCTG
GGCCGTCGCGCCCGCTGCTGTCAGGCGCCCATCGCGTGGAGCTATCCGCTGACCGAGCTGGCCACCGGCCTGCTGTTTAT
CCTCGCCGGAGCTTTGCTGGCGCCGGGCCTGCCGCTGGCGGGCGGCCTGGTGCTGCTCTCGTTCCTGCTGATACTGGCGC
GGATTGACGCCCGGACCCAGCTGCTGCCCGATCGCCTGACTCTGCCCCTGCTGTGGGCCGGGCTGCTGTTCAATCTTAAC
GAGGTGTACATTGCCCTGCCGGATGCGGTCGCCGGGGCGATGGCCGGTTATCTGGCGCTGTGGTCGGTCTACTGGCTGTT
CCGCCTGCTGACCGGAAAAGAGGCGCTGGGCTATGGCGATTTTAAGCTGCTGGCGGCGCTGGGCGCCTGGTGCGGCTGGC
AGGTTCTGCCGCAGGTGCTGTTGCTCGCTTCGGCCAGCGGGCTGGTGTGGACCCTACTGCAACGCCTGTGGACCCGGCAG
TCGCTGCAGCAGCCGCTGGCCTTCGGCCCCTGGCTGGCGCTGGCCGGCGGGGGTATTTTTCTCTGGCAGCAGATGATCTA
G

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-109)

• Type IV leader peptidase family (Peptidase_A24) (123-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	49.057	99.624	0.489
pilD	Vibrio campbellii strain DS40M4	46.545	100	0.481
pilD	Acinetobacter nosocomialis M2	46.388	98.872	0.459
pilD	Acinetobacter baumannii D1279779	45.627	98.872	0.451
pilD	Neisseria gonorrhoeae MS11	43.922	95.865	0.421