Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG217_RS16365 Genome accession   NZ_CP108671
Coordinates   3658976..3660100 (+) Length   374 a.a.
NCBI ID   WP_328329764.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01023     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3653976..3665100
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG217_RS16350 (OG217_16360) - 3654733..3655563 (+) 831 WP_328329771.1 hypothetical protein -
  OG217_RS16355 (OG217_16365) - 3655627..3657339 (-) 1713 WP_406154078.1 BACON domain-containing protein -
  OG217_RS16360 (OG217_16370) radA/sms 3657522..3658919 (+) 1398 WP_406154080.1 DNA repair protein RadA Machinery gene
  OG217_RS16365 (OG217_16375) disA 3658976..3660100 (+) 1125 WP_328329764.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG217_RS16370 (OG217_16380) - 3660204..3661061 (-) 858 WP_406154081.1 hypothetical protein -
  OG217_RS16375 (OG217_16385) - 3661236..3661844 (+) 609 WP_328329762.1 phosphatase PAP2 family protein -
  OG217_RS16380 (OG217_16390) - 3661861..3662889 (+) 1029 WP_406154083.1 A/G-specific adenine glycosylase -
  OG217_RS16385 (OG217_16395) - 3663065..3663616 (+) 552 WP_266854649.1 SigE family RNA polymerase sigma factor -
  OG217_RS16390 (OG217_16400) - 3663733..3664356 (+) 624 WP_328329757.1 hypothetical protein -
  OG217_RS16395 (OG217_16405) cseB 3664369..3665067 (+) 699 WP_328329755.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40272.15 Da        Isoelectric Point: 5.0132

>NTDB_id=664839 OG217_RS16365 WP_328329764.1 3658976..3660100(+) (disA) [Streptomyces sp. NBC_01023]
MAANDRAAPGRSGGSSSGNEALMRATLSAVAPGTALRDGLERILRGNTGGLIVLGMDKSVEAMCTGGFVMDVEFAATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVTEALVDLNTLSHTELLELPVVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=664839 OG217_RS16365 WP_328329764.1 3658976..3660100(+) (disA) [Streptomyces sp. NBC_01023]
GTGGCAGCCAATGACCGAGCAGCACCCGGGAGATCCGGCGGGAGCTCGTCCGGCAATGAAGCGCTGATGCGTGCCACGCT
GAGCGCTGTCGCGCCCGGTACCGCGCTGCGCGACGGCCTGGAGCGGATCCTCCGCGGGAACACCGGCGGCCTGATCGTCC
TGGGCATGGACAAGAGCGTCGAAGCGATGTGCACCGGCGGTTTCGTCATGGACGTGGAGTTCGCCGCGACCCGCCTGCGG
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTCGACAAGGATCTGACCAAGATTCTCCGGGCCGGCGTCCAGCTGGTCCC
GGACGCGTCGATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCGGCTTCCCCG
TCGTCTCCGTATCGCAGTCGATGCACCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTGGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTGACGGCGGTCGCGCAGCGTCTTGAGATGGTCCGGCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTGCTCTCCCTCCAGCTGGACGAGCTGATCGCC
GGGGTCGAGCCCGAGCGGGAGCTGGTGGTCAGGGACTATGTGCCGGAGCCGACGGCGAAGCGTTCGCGCACGGTCACCGA
GGCACTGGTCGACCTCAACACGCTCAGCCACACGGAGCTGCTCGAACTGCCCGTGGTGGCAAGGGCGTTGGGATACAGCG
GCTCCCCGGAGACGCTCGACTCGGCGGTGTCGCCGCGCGGGTACCGGCTGCTGGCCAAGGTGCCGAGGCTGCCCGGGGCG
ATCATCGAGCGGCTGGTCGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCTGCGAGCGTGGACGATCTGCAGGCGGTGGA
CGGGGTCGGGGAGGCGCGGGCCCGCAGCGTCCGGGAGGGGCTTTCGCGGCTCGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.045

94.652

0.436