Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG462_RS20125 Genome accession   NZ_CP108669
Coordinates   4515428..4516552 (+) Length   374 a.a.
NCBI ID   WP_056569600.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01077     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4510428..4521552
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG462_RS20110 (OG462_20090) - 4510726..4511553 (+) 828 WP_406059414.1 hypothetical protein -
  OG462_RS20115 (OG462_20095) - 4511668..4513458 (-) 1791 WP_406059416.1 BACON domain-containing protein -
  OG462_RS20120 (OG462_20100) radA/sms 4513620..4515023 (+) 1404 WP_406059418.1 DNA repair protein RadA Machinery gene
  OG462_RS20125 (OG462_20105) disA 4515428..4516552 (+) 1125 WP_056569600.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG462_RS20130 (OG462_20110) - 4516711..4517565 (-) 855 WP_406059420.1 hypothetical protein -
  OG462_RS20135 (OG462_20115) - 4517814..4518485 (+) 672 WP_406059422.1 phosphatase PAP2 family protein -
  OG462_RS20140 (OG462_20120) - 4518519..4519523 (+) 1005 WP_406059424.1 A/G-specific adenine glycosylase -
  OG462_RS20145 (OG462_20125) - 4519757..4520329 (+) 573 WP_055599255.1 SigE family RNA polymerase sigma factor -
  OG462_RS20150 (OG462_20130) - 4520317..4521081 (+) 765 WP_406059426.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40194.04 Da        Isoelectric Point: 5.0197

>NTDB_id=664747 OG462_RS20125 WP_056569600.1 4515428..4516552(+) (disA) [Streptomyces sp. NBC_01077]
MAAKDGAAAPGKSGAGSGNEALMRAALSAVAPGTALRDGLERILRGNTGGLIVLGLDKTVDSMCTGGFVLDVEFAATRLR
ELCKLDGALVLDKDITKIHRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESGT
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVIRDYVPEPTAKRSRTVAEALTELDALTHTELLELPVVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=664747 OG462_RS20125 WP_056569600.1 4515428..4516552(+) (disA) [Streptomyces sp. NBC_01077]
GTGGCAGCCAAGGACGGGGCAGCAGCTCCTGGAAAGTCCGGCGCGGGCTCCGGCAACGAAGCACTCATGCGCGCCGCCCT
GAGCGCGGTCGCGCCGGGCACCGCGCTGCGTGACGGCCTGGAGCGGATCCTCCGCGGCAACACGGGCGGTCTCATCGTGC
TCGGCCTGGACAAAACGGTCGATTCGATGTGCACCGGCGGTTTCGTGCTGGACGTCGAGTTCGCCGCCACGCGCCTGCGT
GAGCTGTGCAAACTCGACGGCGCGCTCGTCCTCGACAAGGACATCACCAAGATTCACCGCGCGGGCGTGCAGCTCGTTCC
GGACGCCTCCATCCCCACGGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCCGTCTCCCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGTGAGCGCCGGGTCCTGGAGGAGTCGGGCACG
ATCCTGTCCCGCGCCAACCAGGCGCTCGCGACCCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTGGCCGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTCACCGCCGTCGCCCAGCGTCTGGAGATGGTCCGCAGGATCG
CCACCGAGATCGCCGAGTACGTGGTCGAGCTCGGCACGGACGGGCGGCTCCTCTCGCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTGATCCGGGACTACGTGCCGGAGCCGACGGCCAAGCGTTCGCGGACGGTGGCGGA
GGCGCTCACCGAGCTGGACGCGCTGACCCACACGGAGCTGCTCGAACTTCCGGTCGTGGCACGGGCGCTGGGCTACAGCG
GTTCGCCCGAGACCCTCGACTCGGCCGTCTCGCCGCGCGGCTACCGGCTCCTCGCCAAGGTGCCGAGGCTGCCGGGCGCG
ATCATCGAGCGGCTCGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCGGCCAGTGTGGACGACCTCCAGACCGTGGA
CGGCGTCGGCGAGGCCCGCGCCCGCAGCGTGCGCGAGGGCCTCTCCCGGCTGGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438