Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   MN088_RS03925 Genome accession   NZ_CP093413
Coordinates   729760..730461 (+) Length   233 a.a.
NCBI ID   WP_004255173.1    Uniprot ID   S6FFV7
Organism   Lactococcus lactis strain AH1     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 724760..735461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MN088_RS03910 (MN088_03910) - 727154..728062 (+) 909 WP_003130548.1 diacylglycerol kinase family protein -
  MN088_RS03915 (MN088_03915) - 728210..728896 (+) 687 WP_004255158.1 amino acid ABC transporter permease -
  MN088_RS03920 (MN088_03920) - 728896..729630 (+) 735 WP_004255171.1 amino acid ABC transporter ATP-binding protein -
  MN088_RS03925 (MN088_03925) mecA 729760..730461 (+) 702 WP_004255173.1 adaptor protein MecA Regulator
  MN088_RS03930 (MN088_03930) - 730464..731795 (+) 1332 WP_010906141.1 MraY family glycosyltransferase -
  MN088_RS03935 (MN088_03935) sufC 731970..732740 (+) 771 WP_004255181.1 Fe-S cluster assembly ATPase SufC -
  MN088_RS03940 (MN088_03940) sufD 732878..734134 (+) 1257 WP_010906140.1 Fe-S cluster assembly protein SufD -
  MN088_RS03945 (MN088_03945) - 734134..735351 (+) 1218 WP_004255189.1 cysteine desulfurase -

Sequence


Protein


Download         Length: 233 a.a.        Molecular weight: 27077.46 Da        Isoelectric Point: 4.1246

>NTDB_id=664511 MN088_RS03925 WP_004255173.1 729760..730461(+) (mecA) [Lactococcus lactis strain AH1]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGTKKDEAEQEPDFIYYSIRYEDIMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKEKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLIATRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=664511 MN088_RS03925 WP_004255173.1 729760..730461(+) (mecA) [Lactococcus lactis strain AH1]
ATGAAATATGAGGATATAAACGAAAATACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAATT
ATCAGACTTTTTCGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTGGTTGATGAGCTTGGTTTAGAAAATCGCT
TTGGAAATGTGGGAATGTTAACTTTCCAAATCCAACCTTTTCCTCAAGGTGTTCATATGATTGTTCATGAAGAAGCGATG
CTAGGTGAAGGTGGAGAAATTCCAGATGACCCAGAAGAGTTTGAAGAATTGATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGGCTTGGTTTACCAGGAACAAAAAAAGACG
AAGCTGAACAAGAGCCAGATTTTATTTATTACTCTATTCGTTATGAAGATATTATGTCTGTCTTAACAGGAATAAAAAAT
GTGAAGTTTGCTGATGAAGAATCAGAGTTTTATCGTTATGATGGCAATTTTTATCTTGTTGTTTTGGATAATCAAAAAGA
AAAAGGCAAGATGCATGTCGAAAGTACCCGTTCACGAATGATGGAATATGGGGAAGCAACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGTCTTATCGCGACACGTGCTTTAGATGTTCTTAGAAAAATCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB S6FFV7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

99.571

100

0.996

  mecA Lactococcus lactis subsp. cremoris KW2

96.996

100

0.97