Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG450_RS17595 Genome accession   NZ_CP108652
Coordinates   4109339..4110463 (+) Length   374 a.a.
NCBI ID   WP_266780013.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01104     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4104339..4115463
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG450_RS17580 (OG450_17555) - 4104756..4105595 (+) 840 WP_405403864.1 hypothetical protein -
  OG450_RS17585 (OG450_17560) - 4105633..4107504 (-) 1872 WP_405403866.1 hypothetical protein -
  OG450_RS17590 (OG450_17565) radA/sms 4107757..4109169 (+) 1413 WP_326670695.1 DNA repair protein RadA Machinery gene
  OG450_RS17595 (OG450_17570) disA 4109339..4110463 (+) 1125 WP_266780013.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG450_RS17600 (OG450_17575) - 4110519..4111316 (-) 798 WP_266786245.1 hypothetical protein -
  OG450_RS17605 (OG450_17580) - 4111721..4112623 (+) 903 WP_405403869.1 A/G-specific adenine glycosylase -
  OG450_RS17610 (OG450_17585) - 4112848..4113492 (+) 645 WP_266780015.1 SigE family RNA polymerase sigma factor -
  OG450_RS17615 (OG450_17590) - 4113480..4114223 (+) 744 WP_266780016.1 hypothetical protein -
  OG450_RS17620 (OG450_17595) cseB 4114234..4114935 (+) 702 WP_266780017.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40291.19 Da        Isoelectric Point: 4.8613

>NTDB_id=664430 OG450_RS17595 WP_266780013.1 4109339..4110463(+) (disA) [Streptomyces sp. NBC_01104]
MAASDRAASPGKSGQGTGNEALMRASLTAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASISTEETGTRHRTADRVSKQCNFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRLIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=664430 OG450_RS17595 WP_266780013.1 4109339..4110463(+) (disA) [Streptomyces sp. NBC_01104]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GACCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGAGGCCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACGGGCGGCTTCGTGCTGGACGTGGAATTCACCGCGACCCGGCTGCGT
GAGCTCGCCAAGCTCGACGGGGCTCTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGCGTCCAGCTGGTCCC
GGACGCCTCGATCTCAACCGAGGAGACGGGCACCCGCCACCGCACCGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCCG
TGGTCTCCGTCTCGCAGTCGATGCACCTCATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGGGCCAACCAGGCTCTCGCCACGCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTCGCCCAGCGGCTGGAGATGGTCCGGCTGATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTCGGGACCGACGGCCGCCTTCTCTCGCTCCAGCTGGACGAGTTGATCGCC
GGGGTCGAGCCGGAGCGCGAGCTGGTGGTGCGCGACTACGTGCCGGAGCCCACGGCGAAGCGCTCGCGCACGGTGGCGGA
GGCGCTCACCGAGCTGGACGCGCTGTCCCACACCGAGCTGCTCGAACTCCCGGTGGTGGCAAGGGCGCTGGGGTACAGCG
GTTCCCCGGAGACCCTCGACTCGGCGGTGTCGCCGCGCGGTTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCGGCCAGCGTGGACGATCTCCAGACGGTGGA
CGGCGTCGGCGAGGCCCGGGCGCGCAGTGTGCGCGAGGGGCTGTCGCGACTGGCCGAGTCGTCGATCCTCGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436