Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PSCI_RS10195 Genome accession   NZ_AP014637
Coordinates   2209146..2209556 (+) Length   136 a.a.
NCBI ID   WP_045485956.1    Uniprot ID   -
Organism   Pseudomonas sp. StFLB209     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2204146..2214556
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSCI_RS10165 (PSCI_2009) - 2204187..2205191 (-) 1005 WP_045485942.1 aspartate carbamoyltransferase catalytic subunit -
  PSCI_RS10170 (PSCI_2010) pyrR 2205204..2205722 (-) 519 WP_045485945.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PSCI_RS10175 (PSCI_2011) ruvX 2205834..2206274 (-) 441 WP_045485948.1 Holliday junction resolvase RuvX -
  PSCI_RS10180 (PSCI_2012) - 2206274..2206843 (-) 570 WP_045485950.1 YqgE/AlgH family protein -
  PSCI_RS10185 (PSCI_2013) - 2206952..2207854 (-) 903 WP_045485952.1 energy transducer TonB -
  PSCI_RS10190 (PSCI_2014) gshB 2207978..2208931 (-) 954 WP_045485954.1 glutathione synthase -
  PSCI_RS10195 (PSCI_2015) pilG 2209146..2209556 (+) 411 WP_045485956.1 twitching motility response regulator PilG Regulator
  PSCI_RS10200 (PSCI_2016) pilH 2209600..2209965 (+) 366 WP_045494110.1 twitching motility response regulator PilH -
  PSCI_RS10205 (PSCI_2017) - 2209981..2210520 (+) 540 WP_045485959.1 chemotaxis protein CheW -
  PSCI_RS10210 (PSCI_2018) - 2210553..2212595 (+) 2043 WP_045485963.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15053.54 Da        Isoelectric Point: 7.9359

>NTDB_id=66442 PSCI_RS10195 WP_045485956.1 2209146..2209556(+) (pilG) [Pseudomonas sp. StFLB209]
MEQHAPALKVMVIDDSRTIRRTAETILKNAGCEVITAVDGFDALARIVDHHPRIIFVDIMMPRLDGYQTCALVKNNRAFK
STPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSPEELLSAIKAHVPGFVAVEQHVP

Nucleotide


Download         Length: 411 bp        

>NTDB_id=66442 PSCI_RS10195 WP_045485956.1 2209146..2209556(+) (pilG) [Pseudomonas sp. StFLB209]
ATGGAACAGCACGCCCCAGCCTTGAAGGTCATGGTCATCGATGACTCGCGGACCATTCGCCGCACCGCTGAAACCATCCT
GAAAAACGCCGGTTGTGAGGTCATCACGGCCGTCGACGGGTTCGATGCCCTGGCCCGGATCGTCGATCATCACCCGCGAA
TCATCTTCGTCGATATCATGATGCCGCGTCTGGATGGCTATCAGACCTGCGCGCTGGTCAAGAACAACCGGGCGTTCAAG
TCCACGCCGGTGATCATGCTGTCGTCGCGTGACGGGCTGTTCGACAAGGCCAAGGGCCGCATCGTCGGCTCAGATCAGTT
TCTGACCAAGCCTTTCAGCCCGGAAGAACTGCTCAGCGCAATCAAGGCCCATGTGCCTGGCTTCGTTGCCGTTGAACAAC
ATGTACCGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.4

91.912

0.647

Multiple sequence alignment