Detailed information NTG0066432

Bioinformatically predicted

Overview

• Name: pilS
• Type: Regulator
• Locus tag: PSCI_RS05100
• Genome accession: NZ_AP014637
• Coordinates: 1097002..1098594 (+)
• Length: 530 a.a.
• NCBI ID: WP_045483641.1
• Uniprot ID: A0A077LIK5
• Organism: Pseudomonas sp. StFLB209
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1092002..1103594

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSCI_RS05080 (PSCI_1003)	pgeF	1093774..1094505 (-)	732	WP_045483629.1	peptidoglycan editing factor PgeF	-
PSCI_RS05085 (PSCI_1004)	rluD	1094502..1095464 (-)	963	WP_045483632.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
PSCI_RS05090 (PSCI_1005)	-	1095613..1096635 (+)	1023	WP_045483635.1	outer membrane protein assembly factor BamD	-
PSCI_RS05095 (PSCI_1006)	-	1096770..1097012 (+)	243	WP_045483638.1	PP0621 family protein	-
PSCI_RS05100 (PSCI_1007)	pilS	1097002..1098594 (+)	1593	WP_045483641.1	ATP-binding protein	Regulator
PSCI_RS05105 (PSCI_1008)	pilR	1098597..1099937 (+)	1341	WP_045483644.1	sigma-54 dependent transcriptional regulator	Regulator
PSCI_RS05110 (PSCI_1009)	thiO	1099934..1101031 (-)	1098	WP_045483647.1	glycine oxidase ThiO	-
PSCI_RS05115 (PSCI_1010)	-	1101062..1101466 (-)	405	WP_045483649.1	type IV pilin protein	-

Sequence

Protein

• Length: 530 a.a.
• Molecular weight: 58689.98 Da
• Isoelectric Point: 7.2571

>NTDB_id=66432 PSCI_RS05100 WP_045483641.1 1097002..1098594(+) (pilS) [Pseudomonas sp. StFLB209]
MIAEPLALGSALAQRILRLYHLYRLIIGVMLVLLVSSDLDAELLEMANPSLFRAGCWIYLVFNILIVVLLERPRYKALMF
SLALSDTLLLSSLFYAGGGPASGIGNLLIASVAISNILLRGRIGLLIAAVSAIGIIYLTFYLSIANPKTSSDYVQAGGLG
ALCFAVALLMQALTARLRFSEVLAEQRAVDVDNLEELNGLILQRMHTGILVLDAGRRVLLINQSALNLLGHEALLGRVID
DYCPHLVERLRHWRMNPIRTADSFKNSPAGPALQASFATLNRHEQRQTLVFIEDLSQVALQAQQLKLAAIGRLTAGIAHE
VRNPLGAISHAVQLLEESEELPPPDRRLAQIIHEQSRRINVVIENVLQLSRRREAEPELLNLAVWLEEFVSQWRYSAAPR
HQLHCETGSGVLSTRFDPDQLTQVLANLVQNGLRHSGQAHDQAQVWLRLYHHPQSNLPTLDVLDDGAGVSEQHLGKMFEP
FFTTQTKGTGLGLYLSRELCASNQAHLEYSRRPEGGSCLRITFAHPFKLS

Nucleotide

• Length: 1593 bp

>NTDB_id=66432 PSCI_RS05100 WP_045483641.1 1097002..1098594(+) (pilS) [Pseudomonas sp. StFLB209]
GTGATCGCTGAGCCGCTGGCCCTCGGCAGCGCCCTGGCGCAGCGGATCCTGCGCCTGTACCACCTCTATCGGCTGATCAT
CGGTGTCATGCTGGTGCTGCTGGTCTCCAGCGACCTGGATGCCGAATTGCTGGAAATGGCCAACCCGAGCCTGTTCCGCG
CTGGCTGCTGGATCTATCTGGTTTTCAACATCCTGATCGTCGTGCTGCTGGAGCGGCCGCGCTACAAAGCGCTGATGTTC
AGCCTGGCACTGAGTGACACGCTGTTGTTGTCGAGCCTGTTCTATGCCGGCGGCGGCCCGGCCAGCGGCATCGGCAACCT
GCTGATTGCCTCGGTGGCCATCAGCAACATCCTGCTGCGTGGACGCATCGGCTTGCTGATCGCTGCGGTGTCGGCCATCG
GCATCATTTACCTGACCTTCTACCTGAGCATCGCCAACCCGAAGACCTCCAGCGACTATGTCCAGGCTGGCGGCCTTGGC
GCCTTGTGCTTTGCCGTGGCCTTGCTGATGCAGGCGCTGACCGCCCGTTTGCGCTTCAGCGAGGTGCTGGCCGAGCAACG
CGCCGTAGACGTCGATAACCTTGAAGAGCTCAACGGTCTGATCCTGCAGCGCATGCACACCGGCATACTGGTGCTCGATG
CCGGCCGACGGGTGTTGCTGATCAACCAGAGTGCCCTGAACCTGTTGGGCCATGAAGCCTTGCTGGGGCGGGTTATCGAT
GATTACTGCCCGCACCTGGTCGAACGCCTGCGCCATTGGCGCATGAACCCGATAAGAACCGCCGACAGCTTCAAGAACTC
GCCCGCAGGCCCGGCCCTGCAAGCCAGCTTCGCCACCCTCAACCGTCACGAGCAACGTCAGACCCTGGTATTTATCGAGG
ATCTGTCGCAAGTCGCCCTGCAAGCCCAGCAACTCAAGCTGGCCGCAATCGGGCGCCTGACCGCCGGCATCGCACACGAA
GTCCGCAACCCGCTGGGCGCGATCAGCCACGCCGTACAGTTGCTTGAAGAGTCCGAAGAGCTGCCCCCCCCTGACCGGCG
GCTGGCGCAGATCATTCACGAGCAGTCCCGACGCATCAATGTGGTCATCGAGAACGTTCTGCAACTTTCACGACGTCGTG
AGGCCGAGCCGGAGCTGCTGAACCTTGCCGTGTGGCTTGAAGAGTTCGTCAGCCAGTGGCGCTACAGCGCAGCGCCCCGG
CATCAGTTGCATTGCGAGACCGGCAGCGGAGTGCTCAGTACCCGGTTCGATCCGGACCAGTTGACCCAGGTCCTTGCCAA
TCTGGTGCAGAACGGCCTTCGCCACAGCGGCCAGGCGCACGACCAGGCGCAGGTCTGGCTACGGTTGTATCACCATCCCC
AGAGCAACCTGCCGACCCTCGACGTGCTGGACGACGGCGCCGGAGTGTCCGAGCAACATCTGGGCAAGATGTTCGAGCCC
TTTTTCACCACGCAAACCAAAGGCACGGGACTCGGGCTTTACCTGTCCCGTGAGCTGTGTGCAAGCAACCAGGCCCACCT
GGAATATTCCAGGCGGCCTGAAGGTGGCAGTTGCCTGCGCATTACCTTCGCCCACCCGTTCAAATTGAGTTGA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (417-523)

• His Kinase A (phospho-acceptor) domain (HisKA) (311-373)

• PAS domain (PAS_8) (202-244)

3D structure

• AlphaFold DB: A0A077LIK5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilS	Pseudomonas aeruginosa PAK	58.491	100	0.585