Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG762_RS19005 Genome accession   NZ_CP108632
Coordinates   4197346..4198470 (+) Length   374 a.a.
NCBI ID   WP_405880523.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01136     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4192346..4203470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG762_RS18990 (OG762_19075) - 4192521..4193381 (+) 861 WP_405880520.1 hypothetical protein -
  OG762_RS18995 (OG762_19080) - 4193470..4195287 (-) 1818 WP_405880521.1 BACON domain-containing protein -
  OG762_RS19000 (OG762_19085) radA/sms 4195857..4197266 (+) 1410 WP_405885599.1 DNA repair protein RadA Machinery gene
  OG762_RS19005 (OG762_19090) disA 4197346..4198470 (+) 1125 WP_405880523.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG762_RS19010 (OG762_19095) - 4198614..4199429 (-) 816 WP_405880524.1 hypothetical protein -
  OG762_RS19015 (OG762_19100) - 4199789..4200712 (+) 924 WP_405880525.1 A/G-specific adenine glycosylase -
  OG762_RS19020 (OG762_19105) - 4200981..4201532 (+) 552 WP_405880526.1 SigE family RNA polymerase sigma factor -
  OG762_RS19025 (OG762_19110) - 4201520..4202230 (+) 711 WP_405880527.1 hypothetical protein -
  OG762_RS19030 (OG762_19115) cseB 4202250..4202954 (+) 705 WP_405880528.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40150.92 Da        Isoelectric Point: 4.9269

>NTDB_id=664103 OG762_RS19005 WP_405880523.1 4197346..4198470(+) (disA) [Streptomyces sp. NBC_01136]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFVLDVDFTATRLR
ELCKLDGGIVVDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSELDALSHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGSLQKLLAASVDELQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=664103 OG762_RS19005 WP_405880523.1 4197346..4198470(+) (disA) [Streptomyces sp. NBC_01136]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCATT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGGCTCGAGCGAATCCTCCGCGGCAACACCGGCGGACTCATCGTGC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGCACGGGCGGCTTCGTCCTGGACGTCGACTTCACGGCGACCCGGTTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCGTCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTCCAGCTCGTGCC
CGACCCGACGATCCCGACGGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTGAGCAAGCAGGTCGGCTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGTCTGATCGCGCTGTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGTCGGCGGTGGCGCAGCGCCTGGAGATGGTGCGCCGTATCG
CGACGGAGATCGCCGAGTACGTGGTGGAGTTGGGCACCGACGGGCGTCTGCTCGCGCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCCGAGCGGGAGCTGGTGGTCCGGGACTACGTGCCCGAGCCGACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCGCTCTCCGAGCTGGACGCCCTCAGCCACGCGGAGCTGCTCGAACTGCCCACGGTCGCGAGAGCCTTGGGCTACACCG
GCTCCCCCGAGGCACTCGACTCCGCGGTCTCCCCGCGCGGTTTCCGCCTCCTCGCCAAGGTCCCGCGCCTGCCCGGCGCG
ATCATCGACCGGCTCGTCGAGCATTTCGGCAGCCTGCAGAAGCTGCTCGCCGCGAGTGTCGACGAGCTTCAGGCGGTGGA
CGGGGTCGGCGAGGCGAGGGCGCGCAGCGTCCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438