Detailed information NTG0664094

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG762_RS14500
• Genome accession: NZ_CP108632
• Coordinates: 3213443..3214729 (-)
• Length: 428 a.a.
• NCBI ID: WP_390927316.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01136
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3208443..3219729

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG762_RS14490 (OG762_14555)	-	3209595..3212219 (-)	2625	WP_405879745.1	valine--tRNA ligase	-
OG762_RS14495 (OG762_14560)	-	3212355..3213353 (+)	999	WP_405879746.1	hypothetical protein	-
OG762_RS14500 (OG762_14565)	clpX	3213443..3214729 (-)	1287	WP_390927316.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG762_RS14505 (OG762_14570)	clpP	3214901..3215581 (-)	681	WP_362087703.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG762_RS14510 (OG762_14575)	clpP	3215719..3216324 (-)	606	WP_149513863.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG762_RS14515 (OG762_14580)	tig	3216765..3218162 (-)	1398	WP_405879747.1	trigger factor	-
OG762_RS14530 (OG762_14595)	-	3218907..3219101 (-)	195	WP_329368370.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46794.62 Da
• Isoelectric Point: 4.8201

>NTDB_id=664094 OG762_RS14500 WP_390927316.1 3213443..3214729(-) (clpX) [Streptomyces sp. NBC_01136]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQNRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
PALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=664094 OG762_RS14500 WP_390927316.1 3213443..3214729(-) (clpX) [Streptomyces sp. NBC_01136]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAAGAAGAACTCGCGGAAACGA
GCGAGGTCCGCTGGGAGGAGCTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGTCG
GCCAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGGCAGAACCG
GGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACACTGCTCGCCCAGA
CCCTCGCGCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGTAAGAGCGAAAACCCGTCGATCACGCGAGACGTGTCCGGCGAGGGCGTTCAGCAGGCGC
TGCTCAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGACGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGCTCATCGAGTCGAGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGCTCGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCCG
AGGACCTCGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGACTGCCCGTCATCACCTCGGTCCACAACCTCGACCGC
CCTGCGCTCCTGCAGATCCTCGTGGAGCCGCGCAACGCGCTCGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCGATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
GCCGACGTGGTCCTGTCGAACGTCAACCCGACGCTGATCCCGCGCGACGCGCGCGGACGCGGCCCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521