Detailed information NTG0663929

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG317_RS13090
• Genome accession: NZ_CP108612
• Coordinates: 2971802..2973085 (-)
• Length: 427 a.a.
• NCBI ID: WP_313946325.1
• Uniprot ID: A0ACC6PUA7
• Organism: Streptomyces sp. NBC_01167
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2966802..2978085

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG317_RS13080 (OG317_13080)	-	2967999..2970623 (-)	2625	WP_340473100.1	valine--tRNA ligase	-
OG317_RS13085 (OG317_13085)	-	2970760..2971725 (+)	966	WP_340473101.1	hypothetical protein	-
OG317_RS13090 (OG317_13090)	clpX	2971802..2973085 (-)	1284	WP_313946325.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG317_RS13095 (OG317_13095)	clpP	2973231..2973914 (-)	684	WP_313946324.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG317_RS13100 (OG317_13100)	-	2973970..2974575 (-)	606	WP_327686879.1	ATP-dependent Clp protease proteolytic subunit	-
OG317_RS13105 (OG317_13105)	tig	2974815..2976209 (-)	1395	WP_340473102.1	trigger factor	-
OG317_RS13120 (OG317_13120)	-	2976763..2977785 (-)	1023	WP_340473103.1	alcohol dehydrogenase	-
OG317_RS13125 (OG317_13125)	-	2977876..2978070 (-)	195	WP_313946321.1	hypothetical protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46714.55 Da
• Isoelectric Point: 4.8265

>NTDB_id=663929 OG317_RS13090 WP_313946325.1 2971802..2973085(-) (clpX) [Streptomyces sp. NBC_01167]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGAGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
EDVVHNNVNPTLVPRVVKNEGRHEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=663929 OG317_RS13090 WP_313946325.1 2971802..2973085(-) (clpX) [Streptomyces sp. NBC_01167]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAACTCGCCGAGACGA
GCGAGGTCCGCTGGGAAGAACTTCCCAAGCCTCGTGAGATCTATGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTGGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGAGGCGCGGGCCG
GGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTGGCCCAGA
CGCTCGCCCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGATATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAAAACCCGTCGATCACGCGCGATGTGTCCGGTGAGGGCGTCCAGCAGGCGC
TGCTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCGTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGAGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCCGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATCCTGGTCGAGCCGCGGAACGCGCTGGTGAAGCAGTACCAGCGTTTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCGCCCGGCGCTGGAGGCGATCGCGGACCAGGCGATCCTGCGCGGCACGGGCGCGCGTGGCCTGC
GGGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACG
GAGGACGTGGTCCACAACAACGTGAACCCGACGCTGGTGCCGCGGGTCGTGAAGAACGAGGGGCGCCACGAGAAGTCGGC
GTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	94.145	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.269	96.721	0.515