Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG448_RS13315 Genome accession   NZ_CP108609
Coordinates   2914193..2915317 (+) Length   374 a.a.
NCBI ID   WP_217465155.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01171     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2909193..2920317
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG448_RS13300 (OG448_13275) - 2909945..2910760 (+) 816 WP_405553770.1 hypothetical protein -
  OG448_RS13305 (OG448_13280) - 2910757..2912460 (-) 1704 WP_405553772.1 BACON domain-containing protein -
  OG448_RS13310 (OG448_13285) radA/sms 2912703..2914112 (+) 1410 WP_405553773.1 DNA repair protein RadA Machinery gene
  OG448_RS13315 (OG448_13290) disA 2914193..2915317 (+) 1125 WP_217465155.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG448_RS13320 (OG448_13295) - 2915450..2916277 (-) 828 WP_405553775.1 hypothetical protein -
  OG448_RS13325 (OG448_13300) - 2916459..2917334 (+) 876 WP_405553777.1 A/G-specific adenine glycosylase -
  OG448_RS13330 (OG448_13305) - 2917607..2918146 (+) 540 WP_405553779.1 SigE family RNA polymerase sigma factor -
  OG448_RS13335 (OG448_13310) - 2918182..2918787 (+) 606 WP_405553780.1 hypothetical protein -
  OG448_RS13340 (OG448_13315) cseB 2918832..2919536 (+) 705 WP_405553782.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40113.92 Da        Isoelectric Point: 4.9235

>NTDB_id=663879 OG448_RS13315 WP_217465155.1 2914193..2915317(+) (disA) [Streptomyces sp. NBC_01171]
MAANDRAAAPGKSGGSAGADGLMRASLSAVAPGTPLRDGLERVLRGNTGGLILLGWDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPDRELVVRDYVPEPTAKRSRTVEEALFELDALSHAELLELGTVARGMGYTASPESLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=663879 OG448_RS13315 WP_217465155.1 2914193..2915317(+) (disA) [Streptomyces sp. NBC_01171]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTGCCGATGGCCTGATGCGCGCCTCGCT
GAGCGCCGTTGCCCCGGGCACGCCCCTGCGCGACGGTCTGGAGCGGGTCCTGCGCGGCAACACCGGCGGACTGATCCTGC
TGGGCTGGGACAAGACGGTCGAGGCGATGTGCACCGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTGGACGGCGGCATCGTCCTCTCCTCGGACCTGTCGAAGATCCTGCGCGCCGGTGTCCAGCTCGTCCC
GGACCCCACGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACCGCCGACCGCGTCTCCAAGCAGGTCGGCTTCCCCG
TGGTCTCGGTGTCCCAGTCGATGCGGCTGATCGCGCTGTACGTCGACGGGCAGCGCCGGGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTCGTGACGGTCCGGGACGTCTCCGCGGTCGCGCAGCGCCTGGAGATGGTCCGGCGCATCG
CCACCGAGATCGCGGAGTACGTGGTCGAGCTGGGTACGGACGGCCGTCTGCTGGCGCTCCAGTTGGAGGAGCTGATCGCC
GGGGTCGAGCCGGACCGTGAGCTGGTCGTCCGGGACTACGTGCCCGAGCCGACGGCGAAGCGCTCGCGCACGGTGGAGGA
GGCGCTGTTCGAGCTGGACGCGCTGAGCCATGCGGAACTGCTCGAACTGGGCACGGTGGCGCGGGGCATGGGGTACACCG
CGTCTCCCGAGTCGCTGGACTCGGCGGTCTCCCCCCGCGGGTTCCGGTTGCTGGCGAAGGTTCCCCGGTTGCCCGGTGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGTGGTCTGCAGAAGTTGCTCGCCGCCAGCGTGGATGATCTTCAGGCCGTCGA
CGGCGTGGGGGAGGCTCGGGCTCGCAGCGTGCGGGAGGGGCTCTCGCGGCTGGCGGAGTCCTCGATTCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441