Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MNR01_RS15125 Genome accession   NZ_CP093341
Coordinates   3368165..3368563 (+) Length   132 a.a.
NCBI ID   WP_115843698.1    Uniprot ID   -
Organism   Lysobacter sp. S4-A87     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3363165..3373563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNR01_RS15110 (MNR01_15110) tsaB 3365155..3365877 (+) 723 WP_241918580.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  MNR01_RS15115 (MNR01_15115) - 3365967..3366842 (-) 876 WP_241918581.1 energy transducer TonB -
  MNR01_RS15120 (MNR01_15120) gshB 3366839..3367789 (-) 951 WP_241918582.1 glutathione synthase -
  MNR01_RS15125 (MNR01_15125) pilG 3368165..3368563 (+) 399 WP_115843698.1 twitching motility response regulator PilG Regulator
  MNR01_RS15130 (MNR01_15130) - 3368583..3368948 (+) 366 WP_115843696.1 response regulator -
  MNR01_RS15135 (MNR01_15135) - 3368956..3369516 (+) 561 Protein_2977 chemotaxis protein CheW -
  MNR01_RS15140 (MNR01_15140) - 3369585..3371609 (+) 2025 WP_241918583.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14710.06 Da        Isoelectric Point: 7.1360

>NTDB_id=663836 MNR01_RS15125 WP_115843698.1 3368165..3368563(+) (pilG) [Lysobacter sp. S4-A87]
MLDEVRNGSLGGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIKN
NHLFKGTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRTHVNA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=663836 MNR01_RS15125 WP_115843698.1 3368165..3368563(+) (pilG) [Lysobacter sp. S4-A87]
ATGCTAGACGAGGTCCGCAACGGCAGCCTCGGCGGTCTGAAGGTCATGGTGATCGACGATTCCAAGACCATCCGCCGAAC
CGCCGAGACGCTGCTGAAACGAGAAGGCTGTGAGGTGGTTACCGCCACCGACGGCTTTGAGGCGTTGGCGAAGATCGCCG
ACCAGCAGCCACAAATCATCTTCGTGGACATCATGATGCCGCGCCTGGACGGCTATCAGACCTGCGCCCTGATCAAGAAC
AACCATCTGTTCAAGGGCACGCCGGTCATCATGCTGTCATCGAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCATCGT
CGGCTCCGAGCAGTACCTCACCAAACCATTCACCCGCGAAGAACTGCTCGACGCGATCCGAACGCACGTAAACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

93.939

0.697
  vicR Streptococcus mutans UA159

40.678

89.394

0.364