Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   MNO09_RS08925 Genome accession   NZ_CP093325
Coordinates   1247424..1248218 (+) Length   264 a.a.
NCBI ID   WP_033657730.1    Uniprot ID   -
Organism   Bacillus sp. N5-665     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1242424..1253218
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNO09_RS08910 (MNO09_08830) argR 1243265..1243714 (+) 450 WP_001032581.1 arginine repressor ArgR -
  MNO09_RS08915 (MNO09_08835) recN 1243980..1245719 (+) 1740 WP_000947769.1 DNA repair protein RecN Machinery gene
  MNO09_RS08920 (MNO09_08840) spoIVB 1245838..1247136 (+) 1299 WP_002096319.1 SpoIVB peptidase -
  MNO09_RS08925 (MNO09_08845) spo0A 1247424..1248218 (+) 795 WP_033657730.1 sporulation transcription factor Spo0A Regulator
  MNO09_RS08930 (MNO09_08850) - 1248472..1249033 (+) 562 Protein_1296 PRK06770 family protein -
  MNO09_RS08935 (MNO09_08855) - 1249327..1250853 (+) 1527 WP_000143143.1 glycosyltransferase family 39 protein -
  MNO09_RS08940 (MNO09_08860) - 1251040..1251186 (-) 147 WP_001247671.1 YycC family protein -
  MNO09_RS08945 (MNO09_08865) - 1251237..1251965 (+) 729 WP_000172570.1 glycerophosphodiester phosphodiesterase -
  MNO09_RS08950 (MNO09_08870) - 1252014..1252247 (-) 234 WP_001190198.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29443.15 Da        Isoelectric Point: 6.8438

>NTDB_id=663605 MNO09_RS08925 WP_033657730.1 1247424..1248218(+) (spo0A) [Bacillus sp. N5-665]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLNDMQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=663605 MNO09_RS08925 WP_033657730.1 1247424..1248218(+) (spo0A) [Bacillus sp. N5-665]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTACGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAATGATATGCAGCCGGATGTACTTG
TTTTAGACATTATTATGCCACATTTAGATGGTTTAGCTGTATTAGAGAAAATGCGACATATTGAAAGGCTGAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCGAACGCTACCATTAAACGTCCAC
TTCCATCTTTCCGTTCAGCAACGACAATAGATGGAAAGCCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTATATGTATTTAAGGGAAGCGATCTCTATGGTGTACAATGATATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGCGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCCGAGTTCATCGCAATGGTTGCCGATAAGCTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.15

100

0.811