Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   MNO09_RS08915 Genome accession   NZ_CP093325
Coordinates   1243980..1245719 (+) Length   579 a.a.
NCBI ID   WP_000947769.1    Uniprot ID   A0A2C3PJE8
Organism   Bacillus sp. N5-665     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1238980..1250719
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNO09_RS08895 (MNO09_08815) ispA 1239194..1240084 (+) 891 WP_000150365.1 (2E,6E)-farnesyl diphosphate synthase -
  MNO09_RS08900 (MNO09_08820) dxs 1240387..1242279 (+) 1893 WP_000366437.1 1-deoxy-D-xylulose-5-phosphate synthase -
  MNO09_RS08905 (MNO09_08825) - 1242283..1243122 (+) 840 WP_001274751.1 TlyA family RNA methyltransferase -
  MNO09_RS08910 (MNO09_08830) argR 1243265..1243714 (+) 450 WP_001032581.1 arginine repressor ArgR -
  MNO09_RS08915 (MNO09_08835) recN 1243980..1245719 (+) 1740 WP_000947769.1 DNA repair protein RecN Machinery gene
  MNO09_RS08920 (MNO09_08840) spoIVB 1245838..1247136 (+) 1299 WP_002096319.1 SpoIVB peptidase -
  MNO09_RS08925 (MNO09_08845) spo0A 1247424..1248218 (+) 795 WP_033657730.1 sporulation transcription factor Spo0A Regulator
  MNO09_RS08930 (MNO09_08850) - 1248472..1249033 (+) 562 Protein_1296 PRK06770 family protein -

Sequence

Protein


Download         Length: 579 a.a.        Molecular weight: 65686.84 Da        Isoelectric Point: 4.8592

>NTDB_id=663604 MNO09_RS08915 WP_000947769.1 1243980..1245719(+) (recN) [Bacillus sp. N5-665]
MLSELSIRNFAIIEALNISFQKGLTVLSGETGAGKSIIIDAISLLVGGRGSAEFVRYGTEKAEIEGLFYVEDEKHPCIEK
AEELDIEIEDGMIILKRDIAANGKSVCRVNGKLVTLSILKEIGKTLVDIHGQHETQDLMNEERHMFMLDHFDGDRIVKQL
GIYQNVYADYEKLKKQLKSLSENEQQMAHRLDLIQFQHEEISKADLKMDEEIELTEERLQISNFEKIYKALGDAYRSLSA
DGQGLDNVRSAMGQMESITHLDEVYQENHDSIANSYYLLEEVAYQLREKLDMMEYDPKRLDEIETRLNEIRMLKRKYGNT
VEEILAYADKIEQEIFTIENKDVHIETTKKQLKELESVILKEATSLSTMRHELAEHLTNAIHQELKELYMEKTKFEVRIM
KREGNAEEPLVEGAPVRLTADGYDHVEFYISTNPGEPLKPLSKVASGGELSRIILALKSIFSKHQGVASVIFDEVDTGVS
GRVAQAIAEKIYRVSVNSQVLCITHLPQVASMADSHLFIRKQVANDRTITSVTVLTMEDKVTEIARMISGVEITDLTTEH
AKELLTQAHHFKQTAEAIQ

Nucleotide


Download         Length: 1740 bp        

>NTDB_id=663604 MNO09_RS08915 WP_000947769.1 1243980..1245719(+) (recN) [Bacillus sp. N5-665]
TTGTTATCGGAATTATCGATTAGAAACTTTGCTATTATTGAGGCATTAAATATTTCTTTTCAAAAAGGGTTAACGGTTTT
AAGTGGTGAAACAGGGGCCGGAAAATCGATTATTATTGATGCGATTAGTTTACTTGTAGGTGGCCGTGGTTCAGCGGAAT
TTGTTCGATACGGAACAGAAAAAGCTGAGATAGAAGGGCTATTTTATGTAGAAGATGAAAAGCATCCGTGTATTGAAAAG
GCAGAAGAGTTGGATATAGAAATAGAAGACGGCATGATTATTTTGAAGCGTGATATCGCTGCAAACGGAAAAAGTGTATG
TCGTGTAAATGGGAAACTGGTCACCCTTAGTATATTAAAGGAAATTGGAAAAACACTTGTTGATATTCATGGGCAGCACG
AAACACAAGATTTAATGAATGAAGAGCGTCATATGTTTATGCTTGATCATTTTGATGGAGATCGCATTGTTAAACAATTG
GGTATATATCAAAATGTATACGCTGACTATGAGAAATTAAAAAAACAGTTAAAATCGTTAAGTGAAAATGAACAACAAAT
GGCGCATCGCTTAGATTTAATTCAATTCCAGCATGAAGAAATCAGTAAGGCAGATTTAAAGATGGATGAAGAAATTGAAT
TAACTGAAGAACGATTGCAAATTTCTAATTTCGAAAAAATTTACAAAGCATTAGGCGATGCATATCGCTCGTTAAGTGCT
GACGGACAAGGGTTAGATAATGTACGAAGCGCAATGGGACAAATGGAGAGTATTACACATTTAGATGAAGTGTATCAAGA
AAATCATGATTCAATTGCAAATAGCTACTACTTATTAGAAGAAGTTGCATATCAACTTAGAGAAAAGCTCGATATGATGG
AATATGATCCGAAGCGTTTAGACGAAATTGAAACGCGTTTAAATGAAATTCGTATGCTAAAGAGAAAATATGGAAATACT
GTAGAAGAGATTTTAGCGTATGCTGATAAAATTGAACAAGAAATTTTTACGATTGAAAATAAAGACGTTCATATTGAAAC
GACGAAGAAGCAGTTAAAGGAATTAGAAAGTGTTATTCTGAAAGAAGCAACGTCGTTAAGTACTATGCGTCATGAGCTTG
CAGAGCATCTTACAAATGCCATTCATCAGGAATTAAAAGAATTATATATGGAGAAAACAAAATTTGAAGTGAGAATCATG
AAGAGAGAAGGAAATGCTGAAGAGCCTCTTGTGGAGGGTGCCCCGGTAAGACTTACGGCGGATGGCTACGATCATGTGGA
ATTTTATATTTCGACAAATCCAGGTGAACCGCTAAAACCACTTTCAAAGGTCGCTTCTGGCGGAGAGTTATCTCGAATTA
TTTTAGCTTTAAAAAGCATTTTTTCTAAGCATCAAGGTGTTGCATCTGTTATTTTTGATGAAGTGGATACTGGTGTAAGT
GGTCGAGTTGCACAGGCTATTGCGGAAAAAATTTATCGAGTATCAGTAAACTCGCAAGTACTTTGTATTACGCACTTACC
TCAAGTAGCTTCAATGGCAGATTCACATTTATTTATTCGAAAACAAGTAGCGAATGATCGGACAATTACATCAGTTACCG
TTTTAACTATGGAGGATAAAGTAACAGAAATAGCTCGAATGATTTCTGGTGTGGAAATTACAGATTTAACGACAGAACAT
GCGAAAGAATTACTTACGCAAGCGCATCATTTTAAACAGACAGCAGAGGCTATCCAGTAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2C3PJE8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

59.931

100

0.599