Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG708_RS20700 Genome accession   NZ_CP108591
Coordinates   4485525..4486676 (-) Length   383 a.a.
NCBI ID   WP_327296059.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01180     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4480525..4491676
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG708_RS20670 (OG708_20625) cseB 4480611..4481309 (-) 699 WP_327296063.1 two-component system response regulator CseB -
  OG708_RS20675 (OG708_20630) - 4481322..4482074 (-) 753 WP_327296062.1 hypothetical protein -
  OG708_RS20680 (OG708_20635) - 4482062..4482613 (-) 552 WP_266854649.1 SigE family RNA polymerase sigma factor -
  OG708_RS20685 (OG708_20640) - 4482789..4483817 (-) 1029 WP_405562101.1 A/G-specific adenine glycosylase -
  OG708_RS20690 (OG708_20645) - 4483834..4484442 (-) 609 WP_405562102.1 phosphatase PAP2 family protein -
  OG708_RS20695 (OG708_20650) - 4484626..4485462 (+) 837 WP_405565522.1 hypothetical protein -
  OG708_RS20700 (OG708_20655) disA 4485525..4486676 (-) 1152 WP_327296059.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG708_RS20705 (OG708_20660) radA/sms 4486733..4488130 (-) 1398 WP_405562103.1 DNA repair protein RadA Machinery gene
  OG708_RS20710 (OG708_20665) - 4488291..4489991 (+) 1701 WP_327296057.1 BACON domain-containing protein -
  OG708_RS20715 (OG708_20670) - 4490025..4490828 (-) 804 WP_327296056.1 hypothetical protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 41156.07 Da        Isoelectric Point: 5.1127

>NTDB_id=663582 OG708_RS20700 WP_327296059.1 4485525..4486676(-) (disA) [Streptomyces sp. NBC_01180]
MAANDRAAPGRSGGSSSGNESLMRATLSAVAPGTALRDGLERILRGNTGGLIVLGMDKSVEAMCTGGFVMDVEFAATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTSPRAASGKGPQRSRTVTEALVDLNTLSHTELLELPVVARALGYSGSPETLDSAVSPRGYRLL
AKVPRLPGAIIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=663582 OG708_RS20700 WP_327296059.1 4485525..4486676(-) (disA) [Streptomyces sp. NBC_01180]
GTGGCAGCCAATGACCGAGCAGCACCCGGGAGATCCGGCGGGAGCTCGTCCGGCAATGAATCGCTGATGCGGGCCACGCT
GAGCGCTGTCGCGCCCGGTACCGCGCTGCGCGACGGCCTGGAGCGGATCCTCCGCGGGAACACCGGCGGCCTGATCGTCC
TGGGCATGGACAAGAGCGTCGAAGCGATGTGCACCGGCGGTTTCGTCATGGACGTGGAGTTCGCCGCGACCCGCCTGCGG
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTCGACAAGGATCTGACCAAGATCCTCCGGGCCGGTGTCCAGCTGGTCCC
CGACGCGTCGATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCGGCTTCCCCG
TCGTCTCCGTATCGCAGTCGATGCACCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTGCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTGGCCACGCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTGGCGGGCACCCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTGACGGCGGTCGCGCAGCGTCTTGAGATGGTCCGGCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTGCTCTCCCTCCAGCTGGACGAGCTGATCGCG
GGGGTCGAGCCGGAGCGGGAGCTGGTGGTCAGGGACTACGTGCCGGAGCCGACGTCCCCCAGAGCTGCCTCCGGGAAGGG
CCCTCAGCGTTCGCGTACGGTCACCGAGGCTCTGGTCGACCTCAACACGCTCAGCCACACAGAGCTGCTCGAACTGCCCG
TGGTGGCAAGGGCGCTGGGGTACAGCGGCTCCCCGGAGACGCTCGACTCGGCGGTGTCGCCGCGCGGGTACCGGCTGCTG
GCCAAGGTGCCGAGGCTGCCCGGGGCGATCATCGAGCGGCTGGTCGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCTGC
GAGCGTGGACGATCTGCAGACGGTGGACGGAGTCGGCGAGGCGCGGGCCCGTAGCGTCCGGGAAGGGCTTTCGCGGCTCG
CGGAGTCGTCGATCCTGGAGCGGTACGTCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.682

93.734

0.428