Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MN210_RS11795 Genome accession   NZ_CP093310
Coordinates   2812393..2812782 (-) Length   129 a.a.
NCBI ID   WP_241878658.1    Uniprot ID   A0AAT9PF57
Organism   Psychrobacter raelei strain PraFG1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2807393..2817782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MN210_RS11780 (MN210_14840) - 2809487..2810656 (-) 1170 Protein_2295 methyl-accepting chemotaxis protein -
  MN210_RS11785 (MN210_14845) - 2811384..2811923 (-) 540 WP_338412256.1 chemotaxis protein CheW -
  MN210_RS11790 (MN210_14850) - 2811929..2812291 (-) 363 WP_155587319.1 response regulator -
  MN210_RS11795 (MN210_14855) pilG 2812393..2812782 (-) 390 WP_241878658.1 twitching motility response regulator PilG Regulator
  MN210_RS11800 (MN210_14860) - 2813506..2814228 (+) 723 WP_011961373.1 response regulator transcription factor -
  MN210_RS11805 (MN210_14870) - 2814346..2816154 (+) 1809 WP_338412257.1 HAMP domain-containing sensor histidine kinase -
  MN210_RS11810 (MN210_17115) - 2816280..2817188 (-) 909 WP_011961375.1 histone deacetylase -

Sequence

Protein


Download         Length: 129 a.a.        Molecular weight: 14487.72 Da        Isoelectric Point: 5.2202

>NTDB_id=663455 MN210_RS11795 WP_241878658.1 2812393..2812782(-) (pilG) [Psychrobacter raelei strain PraFG1]
MDISFEGLKVMVIDDSKTIRRTAEMLLQRVGCDVVTAVDGFEALAKIADYKPEIIFIDVVMPRLDGYQTCAIVKNNKDFA
DTPVIMLSSKDGLFDKARGRIVGADEYLTKPFSKDDLYTAIQQHHKADR

Nucleotide


Download         Length: 390 bp        

>NTDB_id=663455 MN210_RS11795 WP_241878658.1 2812393..2812782(-) (pilG) [Psychrobacter raelei strain PraFG1]
ATGGACATAAGTTTTGAGGGGCTAAAGGTGATGGTGATTGATGATTCAAAAACCATTCGCCGTACAGCCGAGATGTTATT
ACAAAGAGTGGGCTGTGATGTGGTCACTGCAGTAGATGGATTTGAGGCTTTGGCCAAGATAGCCGACTACAAGCCTGAGA
TTATCTTTATTGATGTGGTGATGCCGCGCTTAGATGGTTATCAAACCTGCGCCATTGTAAAAAATAACAAAGACTTTGCT
GATACCCCAGTGATTATGTTGTCCTCAAAAGATGGTCTGTTTGATAAAGCGCGCGGACGCATTGTGGGGGCAGATGAGTA
TTTGACCAAGCCCTTTAGTAAAGATGACCTATATACGGCCATTCAGCAGCATCACAAGGCCGACCGTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.968

96.124

0.682
  vicR Streptococcus mutans UA159

40.517

89.922

0.364