Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PST29_RS28440 Genome accession   NZ_AP014628
Coordinates   6373912..6374316 (-) Length   134 a.a.
NCBI ID   WP_016964938.1    Uniprot ID   A0A2T6GL00
Organism   Pseudomonas sp. St29     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6368912..6379316
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PST29_RS28425 (PST29_5776) - 6370736..6372799 (-) 2064 WP_060841527.1 methyl-accepting chemotaxis protein -
  PST29_RS28430 (PST29_5777) - 6372939..6373478 (-) 540 WP_060844872.1 chemotaxis protein CheW -
  PST29_RS28435 (PST29_5778) pilH 6373489..6373854 (-) 366 WP_042941009.1 twitching motility response regulator PilH -
  PST29_RS28440 (PST29_5779) pilG 6373912..6374316 (-) 405 WP_016964938.1 twitching motility response regulator PilG Regulator
  PST29_RS28445 (PST29_5780) gshB 6374553..6375524 (+) 972 WP_060841529.1 glutathione synthase -
  PST29_RS28450 (PST29_5781) - 6375654..6376553 (+) 900 WP_060841530.1 energy transducer TonB -
  PST29_RS28455 (PST29_5782) - 6376713..6377282 (+) 570 WP_060841531.1 YqgE/AlgH family protein -
  PST29_RS28460 (PST29_5783) ruvX 6377282..6377719 (+) 438 WP_060841532.1 Holliday junction resolvase RuvX -
  PST29_RS28465 (PST29_5784) pyrR 6377837..6378343 (+) 507 WP_060841533.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14750.31 Da        Isoelectric Point: 7.3848

>NTDB_id=66342 PST29_RS28440 WP_016964938.1 6373912..6374316(-) (pilG) [Pseudomonas sp. St29]
MEQHSNALKVMVIDDSKTIRRTAEMLLKNVGCEVITAVDGFEALAKIVDHHPGIIFVDIMMPRLDGYQTCALVKNHSAFK
SIPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPDFVALAPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=66342 PST29_RS28440 WP_016964938.1 6373912..6374316(-) (pilG) [Pseudomonas sp. St29]
ATGGAACAGCATTCCAACGCCTTGAAGGTGATGGTGATCGACGATTCGAAGACGATTCGCCGCACGGCCGAAATGCTGTT
GAAGAACGTCGGCTGCGAGGTCATCACCGCCGTGGACGGTTTTGAGGCCCTGGCCAAGATCGTCGATCATCATCCCGGCA
TCATCTTCGTCGACATCATGATGCCGCGGCTCGACGGCTATCAGACCTGTGCGCTGGTGAAGAACCACAGCGCGTTCAAG
TCCATTCCCGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTT
TTTGACCAAACCCTTCAGCAAGGAAGAACTGCTGAGCGCAATCAAGGCCCACGTTCCGGACTTTGTCGCGCTTGCGCCAC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2T6GL00

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701
  vicR Streptococcus mutans UA159

42.735

87.313

0.373

Multiple sequence alignment