Detailed information NTG0663407

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG533_RS12315
• Genome accession: NZ_CP108585
• Coordinates: 2784366..2785649 (-)
• Length: 427 a.a.
• NCBI ID: WP_326692942.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01186
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2779366..2790649

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG533_RS12305 (OG533_12315)	-	2782068..2783099 (+)	1032	WP_326690390.1	hypothetical protein	-
OG533_RS12310 (OG533_12320)	-	2783370..2784221 (+)	852	WP_326690389.1	hypothetical protein	-
OG533_RS12315 (OG533_12325)	clpX	2784366..2785649 (-)	1284	WP_326692942.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG533_RS12320 (OG533_12330)	clpP	2785813..2786472 (-)	660	WP_326690388.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG533_RS12325 (OG533_12335)	clpP	2786540..2787145 (-)	606	WP_326692941.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG533_RS12330 (OG533_12340)	tig	2787440..2788882 (-)	1443	WP_326690387.1	trigger factor	-
OG533_RS12345 (OG533_12355)	-	2789509..2789703 (-)	195	WP_326690386.1	hypothetical protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46797.42 Da
• Isoelectric Point: 4.7396

>NTDB_id=663407 OG533_RS12315 WP_326692942.1 2784366..2785649(-) (clpX) [Streptomyces sp. NBC_01186]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWDELPKPREISEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENTPGRDDGIELSKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGEDVE
NILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQID
TTNVLFIVGGAFAGLEKIIESRAGAKGIGFGADIRSKREIEASNQFEEVMPEDLVKFGMIPEFIGRLPVITSVHNLDREA
LLQILMEPKNALIKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVERVVITEE
VVHSNVNPTLVPRARGNGDQQHHEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=663407 OG533_RS12315 WP_326692942.1 2784366..2785649(-) (clpX) [Streptomyces sp. NBC_01186]
GTGGCACGCATCGGTGATGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGTCCAGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCAGAGTCCT
CCGAGGTGCGCTGGGACGAGCTTCCCAAGCCGCGTGAGATCTCTGAGTTCCTGGAGGGCTACGTCGTCGGCCAGGAGGCC
GCGAAGAAGGCCCTCTCCGTAGCGGTCTACAACCACTACAAGCGCGTGCAGGCCGGTGAGAACACCCCGGGGCGCGACGA
CGGCATCGAGCTGTCGAAGTCCAACATCCTGCTGCTCGGCCCCACCGGCTCCGGCAAGACCCTGCTCGCGCAGACGCTCG
CCCGGATGCTCAACGTCCCCTTCGCCATTGCCGACGCCACGGCGCTCACCGAGGCGGGCTACGTCGGCGAGGACGTCGAG
AACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGACGAGAT
CGACAAGGTCGCCCGCAAGAGCGAGAACCCCTCGATCACCCGCGATGTCTCCGGTGAAGGTGTCCAGCAGGCGCTGCTGA
AGATCCTGGAGGGCACGACAGCCTCCGTGCCGCCGCAGGGCGGCAGGAAGCACCCGCACCAGGAGTTCATCCAGATCGAC
ACGACGAACGTGCTGTTCATCGTCGGCGGTGCCTTCGCCGGTCTGGAGAAGATCATCGAGTCCCGCGCGGGCGCCAAGGG
CATCGGCTTCGGTGCCGACATCCGCTCCAAGCGCGAGATCGAGGCGAGCAACCAGTTCGAGGAGGTCATGCCGGAGGACC
TGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTGCCGGTCATCACCTCCGTCCACAACCTCGACCGCGAGGCG
CTGCTCCAGATCCTGATGGAGCCGAAGAACGCCTTGATCAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGTGGAGCT
GGACTTCGACCGTCCCGCGCTGGAGGCCATCGCCGACCAGGCGATCCTCCGGGGCACCGGAGCGCGCGGGCTGCGCGCCA
TCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCCTCCCGCAAGGACGTGGAGCGCGTCGTGATCACCGAAGAG
GTCGTCCACTCCAACGTGAACCCGACTCTGGTGCCGCGGGCCCGTGGCAACGGGGACCAGCAGCACCATGAGAAGAGCGC
CTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (113-310)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (316-394)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.5	93.677	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.257	95.785	0.529