Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MNY35_RS09335 Genome accession   NZ_CP093298
Coordinates   1961308..1962261 (-) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus amyloliquefaciens strain MN-13     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1956308..1967261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNY35_RS09315 (MNY35_09310) - 1957187..1958611 (+) 1425 WP_033575079.1 MDR family MFS transporter -
  MNY35_RS09320 (MNY35_09315) - 1958653..1959597 (-) 945 WP_007410275.1 siderophore ABC transporter substrate-binding protein -
  MNY35_RS09325 (MNY35_09320) - 1959619..1960377 (-) 759 Protein_1829 ABC transporter ATP-binding protein -
  MNY35_RS09330 (MNY35_09325) - 1960371..1961318 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  MNY35_RS09335 (MNY35_09330) ceuB 1961308..1962261 (-) 954 WP_015239156.1 ABC transporter permease Machinery gene
  MNY35_RS09340 (MNY35_09335) - 1962675..1964039 (+) 1365 WP_033575080.1 aspartate kinase -
  MNY35_RS09345 (MNY35_09340) - 1964134..1964229 (+) 96 WP_076983091.1 YjcZ family sporulation protein -
  MNY35_RS09350 (MNY35_09345) phrC 1964376..1964495 (-) 120 WP_033575081.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  MNY35_RS09355 (MNY35_09350) rapC 1964479..1965627 (-) 1149 WP_033575082.1 Rap family tetratricopeptide repeat protein Regulator
  MNY35_RS09360 (MNY35_09355) - 1965780..1967213 (-) 1434 WP_015416810.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=663173 MNY35_RS09335 WP_015239156.1 1961308..1962261(-) (ceuB) [Bacillus amyloliquefaciens strain MN-13]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=663173 MNY35_RS09335 WP_015239156.1 1961308..1962261(-) (ceuB) [Bacillus amyloliquefaciens strain MN-13]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCGGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTTCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATATAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGGATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536