Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OG702_RS15070 Genome accession   NZ_CP108568
Coordinates   3376776..3377834 (+) Length   352 a.a.
NCBI ID   WP_327293239.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01198     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3371776..3382834
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG702_RS15055 (OG702_15085) map 3371833..3372600 (+) 768 WP_327289386.1 type I methionyl aminopeptidase -
  OG702_RS15060 (OG702_15090) - 3373232..3374974 (-) 1743 WP_327293238.1 hypothetical protein -
  OG702_RS15065 (OG702_15095) radA/sms 3375196..3376593 (+) 1398 WP_327289387.1 DNA repair protein RadA Machinery gene
  OG702_RS15070 (OG702_15100) disA 3376776..3377834 (+) 1059 WP_327293239.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG702_RS15075 (OG702_15105) - 3377865..3378743 (-) 879 WP_327289388.1 hypothetical protein -
  OG702_RS15080 (OG702_15110) - 3378874..3379818 (+) 945 WP_327289389.1 A/G-specific adenine glycosylase -
  OG702_RS15085 (OG702_15115) - 3379935..3381179 (-) 1245 WP_327289390.1 HAMP domain-containing sensor histidine kinase -
  OG702_RS15090 (OG702_15120) cseB 3381186..3381866 (-) 681 WP_327289391.1 two-component system response regulator CseB -
  OG702_RS15095 (OG702_15125) - 3381871..3382626 (-) 756 WP_327289392.1 hypothetical protein -

Sequence

Protein


Download         Length: 352 a.a.        Molecular weight: 38289.96 Da        Isoelectric Point: 4.9115

>NTDB_id=663136 OG702_RS15070 WP_327293239.1 3376776..3377834(+) (disA) [Streptomyces sp. NBC_01198]
MRASLSAVAPGTGLRDGLERILRGNTGGLLVLGMDKTVESLCTGGFVLDVEFTATRLRELCKLDGALILDKDITKILRAG
VQLVPDPTIPTEETGTRHRTADRVSKQVNFPVVSVSQSMRLIALYVDGQRRVLEDSAAILSRANQALATLERYKLRLDEV
AGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIAGVEPERELVARDYVPEPTAKRS
RTVAEAMAELDALPQSELIELTTVARALGYTGSPESLDSAVSPRGYRLLAKVPRLPNTVIERLVEHFGGLQKLLAASVDD
LQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=663136 OG702_RS15070 WP_327293239.1 3376776..3377834(+) (disA) [Streptomyces sp. NBC_01198]
ATGCGCGCCTCGCTGAGCGCTGTCGCGCCCGGCACCGGGCTGCGCGACGGGCTCGAACGCATCCTGCGCGGCAACACCGG
CGGCCTGCTCGTGCTGGGCATGGACAAGACGGTGGAGTCGCTGTGCACCGGCGGCTTCGTCCTCGACGTGGAGTTCACCG
CGACCCGGCTGCGCGAGCTGTGCAAGCTGGACGGCGCGCTGATCCTGGACAAGGACATCACCAAGATCCTGCGGGCGGGC
GTCCAGTTGGTGCCCGACCCGACGATCCCGACCGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGGGTCAGCAAGCA
GGTCAACTTCCCCGTGGTGTCGGTCAGCCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGCAGCGCCGGGTCCTTG
AGGACTCGGCGGCGATCCTGTCCCGCGCGAACCAGGCGCTGGCCACCCTGGAGCGGTACAAACTGCGTCTTGACGAGGTG
GCCGGCACGCTGTCGGCGCTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTGACGGCGGTGGCGCAGCGGCTGGAGAT
GGTCCGCCGGATCGCCACCGAGATCGCCGAATACGTCGTGGAGTTGGGCACCGACGGGCGGCTGCTGTCGCTGCAGCTCG
ACGAGCTGATCGCGGGCGTGGAGCCGGAGCGCGAGCTGGTGGCCCGGGACTACGTTCCGGAGCCGACCGCCAAGCGCAGC
CGTACGGTCGCCGAGGCGATGGCCGAGCTGGACGCGCTGCCGCAGAGCGAGCTGATCGAACTGACCACGGTGGCACGGGC
GTTGGGTTACACCGGTTCGCCCGAGTCGCTGGACTCGGCGGTCTCGCCCCGGGGTTACCGGCTGCTGGCCAAGGTGCCGC
GGCTGCCGAACACGGTGATCGAGCGGCTGGTCGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCCGCCAGCGTGGACGAC
CTGCAGGCGGTCGACGGTGTGGGCGAGGCCCGCGCCCGCTCGGTCCGCGAGGGCCTGTCGCGGCTGGCGGAGTCCTCGAT
CCTCGAACGCTACGTGTAG

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(301-337)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(16-129)

DisA bacterial checkpoint controller linker region (DisA-linker)

(133-275)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.665

98.295

0.449