Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   MNG38_RS19790 Genome accession   NZ_CP093289
Coordinates   3797897..3798016 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain H2     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3792897..3803016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNG38_RS19770 (MNG38_19770) albG 3793061..3793762 (+) 702 WP_029726080.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  MNG38_RS19775 (MNG38_19775) ywhL 3793768..3795144 (-) 1377 WP_015250987.1 YncE family protein -
  MNG38_RS19780 (MNG38_19780) ywhK 3795183..3796538 (-) 1356 WP_015250986.1 YncE family protein -
  MNG38_RS19785 (MNG38_19785) rapF 3796768..3797913 (+) 1146 WP_015250985.1 response regulator aspartate phosphatase RapF Regulator
  MNG38_RS19790 (MNG38_19790) phrF 3797897..3798016 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  MNG38_RS19795 (MNG38_19795) ywhH 3798114..3798576 (+) 463 Protein_3851 YbaK/EbsC family protein -
  MNG38_RS19800 (MNG38_19800) speB 3798608..3799480 (-) 873 WP_015250983.1 agmatinase -
  MNG38_RS19805 (MNG38_19805) speE 3799541..3800371 (-) 831 WP_003227543.1 spermidine synthase -
  MNG38_RS19810 (MNG38_19810) pbpG 3800573..3802648 (+) 2076 WP_048654792.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=663022 MNG38_RS19790 WP_009968329.1 3797897..3798016(+) (phrF) [Bacillus subtilis strain H2]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=663022 MNG38_RS19790 WP_009968329.1 3797897..3798016(+) (phrF) [Bacillus subtilis strain H2]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487