Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MNG38_RS16725 Genome accession   NZ_CP093289
Coordinates   3191124..3191768 (-) Length   214 a.a.
NCBI ID   WP_003220716.1    Uniprot ID   -
Organism   Bacillus subtilis strain H2     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3186124..3196768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNG38_RS16690 (MNG38_16690) mrpB 3187314..3187745 (+) 432 WP_038429537.1 Na(+)/H(+) antiporter subunit B -
  MNG38_RS16695 (MNG38_16695) mrpC 3187745..3188086 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  MNG38_RS16700 (MNG38_16700) mrpD 3188079..3189560 (+) 1482 WP_046381299.1 Na+/H+ antiporter subunit D -
  MNG38_RS16705 (MNG38_16705) mrpE 3189566..3190042 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  MNG38_RS16710 (MNG38_16710) mrpF 3190042..3190326 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  MNG38_RS16715 (MNG38_16715) mnhG 3190310..3190684 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  MNG38_RS16720 (MNG38_16720) yuxO 3190725..3191105 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  MNG38_RS16725 (MNG38_16725) comA 3191124..3191768 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  MNG38_RS16730 (MNG38_16730) comP 3191849..3193972 (-) 2124 WP_242139175.1 sensor histidine kinase Regulator
  MNG38_RS16735 (MNG38_16735) comX 3194177..3194398 (-) 222 WP_014480704.1 competence pheromone ComX -
  MNG38_RS16740 (MNG38_16740) - 3194400..3195263 (-) 864 WP_014480705.1 polyprenyl synthetase family protein -
  MNG38_RS16745 (MNG38_16745) degQ 3195448..3195588 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  MNG38_RS16750 (MNG38_16750) - 3195810..3195935 (+) 126 WP_003228793.1 hypothetical protein -
  MNG38_RS16755 (MNG38_16755) - 3196050..3196418 (+) 369 WP_046381300.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24128.51 Da        Isoelectric Point: 4.6857

>NTDB_id=663009 MNG38_RS16725 WP_003220716.1 3191124..3191768(-) (comA) [Bacillus subtilis strain H2]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=663009 MNG38_RS16725 WP_003220716.1 3191124..3191768(-) (comA) [Bacillus subtilis strain H2]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATCTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAGGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

100

100

1