Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   MNG38_RS02345 Genome accession   NZ_CP093289
Coordinates   424047..424445 (-) Length   132 a.a.
NCBI ID   WP_015715226.1    Uniprot ID   A0AA96URL7
Organism   Bacillus subtilis strain H2     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 419047..429445
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNG38_RS02315 (MNG38_02315) yckA 419623..420303 (-) 681 WP_024572176.1 amino acid ABC transporter permease -
  MNG38_RS02320 (MNG38_02320) yckB 420313..421176 (-) 864 WP_029317191.1 transporter substrate-binding domain-containing protein -
  MNG38_RS02325 (MNG38_02325) - 421337..421534 (+) 198 WP_128992271.1 hypothetical protein -
  MNG38_RS02330 (MNG38_02330) yckC 421554..422009 (+) 456 WP_048654748.1 RDD family protein -
  MNG38_RS02335 (MNG38_02335) yckD 422091..422423 (+) 333 WP_015252849.1 YckD family protein -
  MNG38_RS02340 (MNG38_02340) bglC 422577..424010 (+) 1434 WP_048654749.1 6-phospho-beta-glucosidase -
  MNG38_RS02345 (MNG38_02345) nin/comJ 424047..424445 (-) 399 WP_015715226.1 DNA-entry nuclease inhibitor Regulator
  MNG38_RS02350 (MNG38_02350) nucA/comI 424472..424921 (-) 450 WP_003234608.1 DNA-entry nuclease Machinery gene
  MNG38_RS02355 (MNG38_02355) tlpC 425089..426810 (-) 1722 WP_048654750.1 methyl-accepting chemotaxis protein TlpC -
  MNG38_RS02360 (MNG38_02360) hxlB 426921..427478 (-) 558 WP_014478803.1 6-phospho-3-hexuloisomerase -
  MNG38_RS02365 (MNG38_02365) hxlA 427484..428116 (-) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  MNG38_RS02370 (MNG38_02370) hxlR 428345..428707 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14935.90 Da        Isoelectric Point: 4.8991

>NTDB_id=662954 MNG38_RS02345 WP_015715226.1 424047..424445(-) (nin/comJ) [Bacillus subtilis strain H2]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=662954 MNG38_RS02345 WP_015715226.1 424047..424445(-) (nin/comJ) [Bacillus subtilis strain H2]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985