Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG457_RS20645 Genome accession   NZ_CP108554
Coordinates   4579498..4580622 (+) Length   374 a.a.
NCBI ID   WP_150258629.1    Uniprot ID   A0ABQ3SZF2
Organism   Streptomyces sp. NBC_01207     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4574498..4585622
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG457_RS20630 (OG457_20625) - 4574603..4575475 (+) 873 WP_327383938.1 hypothetical protein -
  OG457_RS20635 (OG457_20630) - 4575506..4577275 (-) 1770 WP_327383939.1 hypothetical protein -
  OG457_RS20640 (OG457_20635) radA/sms 4577857..4579269 (+) 1413 WP_327383940.1 DNA repair protein RadA Machinery gene
  OG457_RS20645 (OG457_20640) disA 4579498..4580622 (+) 1125 WP_150258629.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG457_RS20650 (OG457_20645) - 4580777..4581526 (-) 750 WP_327383941.1 hypothetical protein -
  OG457_RS20655 (OG457_20650) - 4581750..4582367 (+) 618 WP_327383942.1 phosphatase PAP2 family protein -
  OG457_RS20660 (OG457_20655) - 4582391..4583380 (+) 990 WP_327383943.1 A/G-specific adenine glycosylase -
  OG457_RS20665 (OG457_20660) - 4583577..4584137 (+) 561 WP_327383944.1 SigE family RNA polymerase sigma factor -
  OG457_RS20670 (OG457_20665) - 4584173..4584805 (+) 633 WP_327383946.1 hypothetical protein -
  OG457_RS20675 (OG457_20670) cseB 4584835..4585548 (+) 714 WP_327383948.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40380.33 Da        Isoelectric Point: 4.9472

>NTDB_id=662903 OG457_RS20645 WP_150258629.1 4579498..4580622(+) (disA) [Streptomyces sp. NBC_01207]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALAELDALTHPELLELAIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=662903 OG457_RS20645 WP_150258629.1 4579498..4580622(+) (disA) [Streptomyces sp. NBC_01207]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGAAAGTCGGGTGCGAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCGCTGCGTGACGGCTTGGAGCGGATCGTCCGCGGCAACACCGGCGGGCTCATCGTCC
TCGGTATGGACAAGAGCGTCGAGGCGATGTGCACCGGCGGCTTCGTCCTGGACGTGGAGTTCACCGCGACCAGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTGCC
GGACGCATCGATCCCGACGGAGGAGACGGGCACGCGCCACCGTACGGCCGACCGCGTCTCCAAGCAGTGCGGCTTCCCGG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTGCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGACTGCTGTCGCTGCAACTGGACGAGCTGACGGTC
GGGATCGAACAGGAGCGGGAGCTGGTCATCCGGGACTACGTGCCGGAACCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCACTGGCGGAGCTGGACGCACTGACGCATCCGGAGCTGCTGGAGCTGGCGATCGTGGCGCGGGCTCTGGGGTACACGG
GCTCGCCGGAGACGCTGGACTCTGCGGTGTCGCCGCGCGGGTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGCGCG
ATCATCGAGCGGCTCGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTGCAGACGGTGGA
CGGGGTGGGCGAGGCCCGTGCGCGGAGCGTCCGCGAGGGCCTGTCCCGCCTGGCGGAATCCTCGATCCTCGAGCGCTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444