Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   MNY58_RS09420 Genome accession   NZ_CP093217
Coordinates   1956317..1956886 (-) Length   189 a.a.
NCBI ID   WP_099090063.1    Uniprot ID   A0A2C6WNW8
Organism   Staphylococcus edaphicus strain CCM 8731     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1951317..1961886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNY58_RS09380 (MNY58_09380) - 1951609..1952961 (-) 1353 WP_099090058.1 isochorismate synthase -
  MNY58_RS09385 (MNY58_09385) - 1953149..1954087 (+) 939 WP_099090059.1 1,4-dihydroxy-2-naphthoate polyprenyltransferase -
  MNY58_RS09390 (MNY58_09390) - 1954141..1954698 (-) 558 WP_099090060.1 GNAT family N-acetyltransferase -
  MNY58_RS09395 (MNY58_09395) - 1954880..1955092 (+) 213 WP_099090061.1 TM2 domain-containing protein -
  MNY58_RS09400 - 1955213..1955302 (+) 90 WP_011303463.1 SAR1012 family small protein -
  MNY58_RS09405 (MNY58_09400) - 1955376..1955804 (-) 429 WP_099090062.1 Ohr family peroxiredoxin -
  MNY58_RS09420 (MNY58_09415) comK/comK1 1956317..1956886 (-) 570 WP_099090063.1 competence protein ComK Regulator
  MNY58_RS09425 (MNY58_09420) - 1957139..1957357 (+) 219 WP_099090064.1 IDEAL domain-containing protein -
  MNY58_RS09430 (MNY58_09425) - 1957439..1958428 (-) 990 WP_099090065.1 lipoate--protein ligase -
  MNY58_RS09435 (MNY58_09430) - 1958628..1958813 (+) 186 WP_002483735.1 DUF2187 family protein -
  MNY58_RS09440 (MNY58_09435) - 1958819..1959421 (+) 603 WP_099090066.1 CPBP family glutamic-type intramembrane protease -
  MNY58_RS09445 (MNY58_09440) - 1959491..1960999 (-) 1509 WP_099090067.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -

Sequence

Protein


Download         Length: 189 a.a.        Molecular weight: 22161.61 Da        Isoelectric Point: 9.5187

>NTDB_id=662622 MNY58_RS09420 WP_099090063.1 1956317..1956886(-) (comK/comK1) [Staphylococcus edaphicus strain CCM 8731]
MIQPYIIKKGDMALQPCSLPIGKYEGSYLVRYKDDSKVLKERVPKIIDRSCRFYGSSYAFKKEDTMRITGISSKPPILFT
PLFPTYFFPTHSDRKEENTWINIHYVHQIKPLKEKKCKVIFVDNQTITANISAHSMHHQYLNGIYYYYMMDRAARVATFD
PESPIDYTKPQLNIYEALAKYSLFENKSS

Nucleotide


Download         Length: 570 bp        

>NTDB_id=662622 MNY58_RS09420 WP_099090063.1 1956317..1956886(-) (comK/comK1) [Staphylococcus edaphicus strain CCM 8731]
ATGATTCAACCCTATATTATAAAAAAAGGTGATATGGCTTTACAACCATGTAGTTTGCCAATTGGTAAGTATGAAGGCAG
TTATCTTGTAAGATATAAAGATGACAGCAAAGTTTTAAAAGAACGAGTGCCCAAAATTATCGATCGCTCTTGTAGGTTTT
ATGGCAGTAGTTACGCTTTTAAAAAAGAAGACACAATGAGAATTACCGGCATTAGCAGTAAACCCCCGATTTTATTTACA
CCTCTTTTTCCTACTTATTTTTTCCCAACGCACTCTGACAGAAAAGAAGAAAATACATGGATTAATATTCATTATGTCCA
CCAGATTAAGCCTCTAAAAGAAAAGAAGTGTAAAGTTATATTTGTAGATAATCAAACAATTACAGCGAATATTTCTGCTC
ACAGTATGCATCACCAATACCTAAATGGTATTTACTACTACTATATGATGGATAGAGCAGCAAGAGTTGCTACATTTGAT
CCAGAATCTCCTATAGATTACACAAAACCACAATTAAATATTTATGAAGCATTAGCAAAGTATTCATTATTTGAAAATAA
ATCATCATAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(4-152)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2C6WNW8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

54.348

97.354

0.529
  comK/comK1 Staphylococcus aureus N315

54.348

97.354

0.529