Detailed information NTG0662622

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OG725_RS23700
• Genome accession: NZ_CP108541
• Coordinates: 5413270..5413953 (+)
• Length: 227 a.a.
• NCBI ID: WP_030122564.1
• Uniprot ID: A0ABY9JH64
• Organism: Streptomyces sp. NBC_01213
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 5408270..5418953

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG725_RS23670 (OG725_23650)	-	5409483..5409677 (+)	195	WP_014156281.1	hypothetical protein	-
OG725_RS23675 (OG725_23655)	-	5409969..5410316 (+)	348	WP_147963426.1	DUF1330 domain-containing protein	-
OG725_RS23690 (OG725_23670)	tig	5410910..5412310 (+)	1401	WP_147963425.1	trigger factor	-
OG725_RS23695 (OG725_23675)	-	5412597..5413202 (+)	606	WP_030122563.1	ATP-dependent Clp protease proteolytic subunit	-
OG725_RS23700 (OG725_23680)	clpP	5413270..5413953 (+)	684	WP_030122564.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG725_RS23705 (OG725_23685)	clpX	5414110..5415408 (+)	1299	WP_147963424.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG725_RS23710 (OG725_23690)	-	5415488..5415889 (+)	402	WP_306104251.1	type II toxin-antitoxin system RelE/ParE family toxin	-
OG725_RS23715 (OG725_23695)	-	5415886..5416191 (+)	306	WP_147963423.1	helix-turn-helix transcriptional regulator	-
OG725_RS23720 (OG725_23700)	-	5416329..5417339 (-)	1011	WP_147963422.1	hypothetical protein	-

Sequence

Protein

• Length: 227 a.a.
• Molecular weight: 24798.19 Da
• Isoelectric Point: 4.7914

>NTDB_id=662622 OG725_RS23700 WP_030122564.1 5413270..5413953(+) (clpP) [Streptomyces sp. NBC_01213]
MVKTHMNNFSGASASGLYTGPQVDNRYVVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMD
PDRDISIYINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPHARVLIHQPSSQTGREQLS
DLEIAANEILRMRTQLEEMLAKHSTTPLEKISEDIERDKILTADDALAYGLVDQIVSTRKTTAGASV

Nucleotide

• Length: 684 bp

>NTDB_id=662622 OG725_RS23700 WP_030122564.1 5413270..5413953(+) (clpP) [Streptomyces sp. NBC_01213]
ATGGTGAAGACCCACATGAACAACTTCTCAGGCGCCTCCGCGAGCGGCCTCTACACCGGCCCGCAGGTGGACAACCGCTA
CGTCGTCCCGCGCTTCGTGGAGCGCACCTCGCAGGGCGTGCGTGAGTACGACCCGTACGCGAAGCTCTTCGAGGAGCGCG
TGATCTTCCTCGGAGTCCAGATCGACGACGCCTCGGCCAACGACGTCATGGCGCAGCTGCTGTGCCTGGAGTCGATGGAC
CCGGACCGTGACATCTCGATCTACATCAACAGCCCCGGCGGCTCGTTCACCGCGCTCACCGCGATCTACGACACGATGCA
GTTCGTGAAGCCGGACATCCAGACGGTCTGCATGGGCCAGGCCGCCTCCGCCGCCGCGGTCCTGCTGGCCGCGGGCACCC
CGGGCAAGCGCATGGCGCTCCCGCACGCCCGTGTGCTGATCCACCAGCCGTCCTCGCAGACCGGCCGTGAGCAGCTCTCC
GACCTGGAGATCGCGGCCAACGAGATCCTGCGGATGCGCACCCAGCTCGAGGAGATGCTGGCCAAGCACTCCACCACCCC
GCTGGAGAAGATCAGCGAGGACATCGAGCGCGACAAGATCCTTACCGCCGACGACGCACTCGCGTACGGTCTGGTGGACC
AGATCGTCTCCACCCGTAAGACCACCGCAGGCGCGTCGGTCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (38-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	50	83.7	0.419
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.872	82.819	0.396
clpP	Lactococcus lactis subsp. cremoris KW2	44.503	84.141	0.374
clpP	Streptococcus thermophilus LMG 18311	43.814	85.463	0.374
clpP	Streptococcus thermophilus LMD-9	43.814	85.463	0.374
clpP	Streptococcus mutans UA159	43.299	85.463	0.37
clpP	Streptococcus pyogenes JRS4	43.299	85.463	0.37
clpP	Streptococcus pyogenes MGAS315	43.299	85.463	0.37
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	43.979	84.141	0.37
clpP	Streptococcus pneumoniae Rx1	43.523	85.022	0.37
clpP	Streptococcus pneumoniae D39	43.523	85.022	0.37
clpP	Streptococcus pneumoniae R6	43.523	85.022	0.37
clpP	Streptococcus pneumoniae TIGR4	43.523	85.022	0.37