Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MNY58_RS04795 Genome accession   NZ_CP093217
Coordinates   1037087..1038130 (+) Length   347 a.a.
NCBI ID   WP_099090435.1    Uniprot ID   A0A2C6WKA0
Organism   Staphylococcus edaphicus strain CCM 8731     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1032087..1043130
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNY58_RS04770 (MNY58_04770) - 1033158..1033877 (+) 720 WP_099090430.1 glutamine amidotransferase -
  MNY58_RS04775 (MNY58_04775) - 1033967..1034953 (-) 987 WP_099090431.1 aromatic acid exporter family protein -
  MNY58_RS04780 (MNY58_04780) map 1035130..1035882 (+) 753 WP_099090432.1 type I methionyl aminopeptidase -
  MNY58_RS04785 (MNY58_04785) - 1035986..1036372 (+) 387 WP_099090433.1 hypothetical protein -
  MNY58_RS04790 (MNY58_04790) liaF 1036389..1037090 (+) 702 WP_099090434.1 cell wall-active antibiotics response protein LiaF -
  MNY58_RS04795 (MNY58_04795) vraS 1037087..1038130 (+) 1044 WP_099090435.1 sensor histidine kinase Regulator
  MNY58_RS04800 (MNY58_04800) vraR 1038120..1038749 (+) 630 WP_099090436.1 response regulator transcription factor Regulator
  MNY58_RS04805 (MNY58_04805) - 1038888..1040052 (-) 1165 Protein_944 YihY/virulence factor BrkB family protein -
  MNY58_RS04810 (MNY58_04810) - 1040456..1040740 (-) 285 WP_099090438.1 hypothetical protein -
  MNY58_RS04815 (MNY58_04815) - 1040747..1041211 (-) 465 WP_099090439.1 low molecular weight protein-tyrosine-phosphatase -
  MNY58_RS04820 (MNY58_04820) - 1041346..1041549 (+) 204 WP_099090440.1 DUF1128 family protein -
  MNY58_RS04825 (MNY58_04825) - 1041563..1042801 (+) 1239 WP_099090441.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40026.57 Da        Isoelectric Point: 6.7780

>NTDB_id=662604 MNY58_RS04795 WP_099090435.1 1037087..1038130(+) (vraS) [Staphylococcus edaphicus strain CCM 8731]
MNHYFRAIGSMLILVYSTFFAIFFIDKVFVNIMYFQGMFYTQIFGIPVLLFLNLMVILLCIIVGSVLAYKINQQNHWLKD
QIERSIEGQTVGINDQNIELYNETIELYQTLVPLNQEVHKLRMKTQNLTNESYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETELKAPLDQQIPVLEKMIQDSQLEMRALLLHLRPIGLKDKSLGEGIKDLVVDLQKKVPMKVVHDI
EEFKVPKGIEDHLFRITQEAISNTLRHSKGTKVTVELFNREAYLLLRIQDNGKGFNVDDKVEQSYGLKNMRERALEIGAT
FHIVSLPDAGTRIEVKAPLNKEDSYAN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=662604 MNY58_RS04795 WP_099090435.1 1037087..1038130(+) (vraS) [Staphylococcus edaphicus strain CCM 8731]
ATGAATCACTATTTTAGAGCAATAGGGTCTATGTTGATATTAGTTTATAGCACATTTTTTGCCATATTCTTTATTGATAA
AGTGTTTGTAAATATAATGTATTTTCAAGGTATGTTTTATACTCAAATATTTGGCATACCGGTGTTACTATTTTTAAATT
TAATGGTGATATTGCTTTGTATTATTGTAGGTTCTGTATTAGCTTATAAAATTAATCAGCAAAATCATTGGTTAAAAGAT
CAAATTGAGCGTTCAATAGAAGGTCAAACGGTAGGTATCAATGATCAAAATATTGAATTGTATAATGAAACAATCGAATT
ATATCAAACATTAGTGCCTTTAAATCAAGAAGTACATAAGTTGAGAATGAAGACGCAAAACTTAACAAATGAATCATATA
ATATCAATGATGTTAAAGTTAAGAAAATCATAGAAGATGAACGACAACGTTTAGCACGTGAATTACATGACTCAGTTAGT
CAACAACTATTCGCAGCTAGTATGATGTTATCTGCAATTAAAGAGACTGAATTAAAAGCTCCCTTAGACCAACAAATACC
GGTATTAGAAAAAATGATTCAGGATTCACAACTAGAGATGAGGGCGTTGCTGTTACACTTAAGACCTATTGGCTTGAAAG
ATAAATCATTAGGTGAGGGTATTAAAGACTTGGTTGTTGATTTACAGAAAAAAGTACCAATGAAAGTTGTTCATGATATT
GAAGAATTTAAAGTGCCAAAGGGTATAGAAGATCATTTATTTCGTATTACTCAAGAAGCGATTTCGAATACTTTACGACA
TTCTAAAGGGACGAAAGTCACTGTTGAATTATTTAATAGAGAAGCGTATTTGCTATTACGGATACAGGATAATGGTAAAG
GTTTTAATGTAGATGATAAGGTAGAACAAAGTTATGGATTAAAAAATATGCGTGAACGTGCACTCGAAATAGGCGCAACG
TTTCATATTGTTTCTTTACCTGATGCAGGTACAAGAATAGAAGTTAAGGCACCATTAAATAAGGAGGATTCATATGCCAA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2C6WKA0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

88.116

99.424

0.876